Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LE165_RS06410 Genome accession   NZ_CP084434
Coordinates   1326772..1327680 (-) Length   302 a.a.
NCBI ID   WP_037545648.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain RMLUG2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1321772..1332680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LE165_RS06385 (LE165_06395) - 1321929..1322603 (-) 675 WP_084951350.1 DUF4064 domain-containing protein -
  LE165_RS06390 (LE165_06400) - 1322876..1323355 (-) 480 WP_070647761.1 DUF4064 domain-containing protein -
  LE165_RS06395 (LE165_06405) - 1323442..1323891 (-) 450 WP_002478516.1 DUF4064 domain-containing protein -
  LE165_RS06400 (LE165_06410) - 1323933..1325933 (-) 2001 WP_012990692.1 FtsX-like permease family protein -
  LE165_RS06405 (LE165_06415) - 1325917..1326666 (-) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  LE165_RS06410 (LE165_06420) braS 1326772..1327680 (-) 909 WP_037545648.1 sensor histidine kinase Regulator
  LE165_RS06415 (LE165_06425) braR 1327686..1328351 (-) 666 WP_084951345.1 response regulator transcription factor Regulator
  LE165_RS12760 - 1328567..1328671 (-) 105 Protein_1232 hypothetical protein -
  LE165_RS06425 (LE165_06435) - 1328890..1330338 (+) 1449 WP_002478511.1 alkaline phosphatase -
  LE165_RS06430 (LE165_06440) wecB 1330524..1331663 (-) 1140 WP_252920628.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35305.88 Da        Isoelectric Point: 7.1984

>NTDB_id=611246 LE165_RS06410 WP_037545648.1 1326772..1327680(-) (braS) [Staphylococcus lugdunensis strain RMLUG2]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLRS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=611246 LE165_RS06410 WP_037545648.1 1326772..1327680(-) (braS) [Staphylococcus lugdunensis strain RMLUG2]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTAATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAACAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAGAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.904

96.689

0.57