Detailed information NTG0611112

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NN994_RS09325
• Genome accession: NZ_CP101646
• Coordinates: 1780286..1781386 (+)
• Length: 366 a.a.
• NCBI ID: WP_024704278.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain UCCSt95
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1775286..1786386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NN994_RS09300 (NN994_09305)	pgsA	1775828..1776370 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NN994_RS09305 (NN994_09310)	-	1776383..1777240 (-)	858	WP_014608803.1	helix-turn-helix domain-containing protein	-
NN994_RS09310 (NN994_09315)	yfmH	1777299..1778576 (-)	1278	WP_011226704.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NN994_RS09315 (NN994_09320)	yfmF	1778578..1779828 (-)	1251	WP_064355698.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NN994_RS09320 (NN994_09325)	yaaA	1779906..1780283 (+)	378	WP_064355696.1	S4 domain-containing protein YaaA	-
NN994_RS09325 (NN994_09330)	recF	1780286..1781386 (+)	1101	WP_024704278.1	DNA replication/repair protein RecF	Machinery gene
NN994_RS09330 (NN994_09335)	guaB	1781555..1783036 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
NN994_RS09335 (NN994_09340)	trpS	1783213..1784235 (-)	1023	WP_011681763.1	tryptophan--tRNA ligase	-
NN994_RS09340 (NN994_09345)	-	1784663..1785535 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42172.35 Da
• Isoelectric Point: 9.2442

>NTDB_id=611112 NN994_RS09325 WP_024704278.1 1780286..1781386(+) (recF) [Streptococcus thermophilus strain UCCSt95]
MWLKKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=611112 NN994_RS09325 WP_024704278.1 1780286..1781386(+) (recF) [Streptococcus thermophilus strain UCCSt95]
ATGTGGCTTAAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACGACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432