Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   RES5_RS04620 Genome accession   NZ_CP084235
Coordinates   933850..934896 (+) Length   348 a.a.
NCBI ID   WP_161510946.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SE2.14     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 928850..939896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RES5_RS04595 (RES5_004595) map 929728..930480 (+) 753 WP_016931021.1 type I methionyl aminopeptidase -
  RES5_RS04600 (RES5_004600) - 930594..931403 (-) 810 Protein_912 SDR family oxidoreductase -
  RES5_RS04605 (RES5_004605) - 931523..932482 (-) 960 Protein_913 HoxN/HupN/NixA family nickel/cobalt transporter -
  RES5_RS04610 (RES5_004610) - 932741..933127 (+) 387 WP_161510945.1 hypothetical protein -
  RES5_RS04615 (RES5_004615) liaF 933152..933853 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  RES5_RS04620 (RES5_004620) vraS 933850..934896 (+) 1047 WP_161510946.1 sensor histidine kinase Regulator
  RES5_RS04625 (RES5_004625) vraR 934886..935515 (+) 630 WP_161510947.1 two-component system response regulator VraR Regulator
  RES5_RS04630 (RES5_004630) - 935578..936789 (-) 1212 WP_053026912.1 YihY/virulence factor BrkB family protein -
  RES5_RS04635 (RES5_004635) - 936988..937272 (-) 285 WP_037551134.1 YtxH domain-containing protein -
  RES5_RS04640 (RES5_004640) - 937278..937742 (-) 465 WP_161517177.1 low molecular weight protein-tyrosine-phosphatase -
  RES5_RS04645 (RES5_004645) - 937884..938093 (+) 210 WP_076689932.1 DUF1128 domain-containing protein -
  RES5_RS04650 (RES5_004650) - 938107..939354 (+) 1248 WP_037551132.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40166.58 Da        Isoelectric Point: 6.0555

>NTDB_id=610224 RES5_RS04620 WP_161510946.1 933850..934896(+) (vraS) [Staphylococcus haemolyticus strain SE2.14]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQDLHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=610224 RES5_RS04620 WP_161510946.1 933850..934896(+) (vraS) [Staphylococcus haemolyticus strain SE2.14]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATTGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATTGAACATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAACATTGAGCTTTATAACGAAACCATAGACCT
TTATCAAACATTAGTTCCGCTAAATCAAGACTTGCACCGTTTACGAATGAAAACGCAAAACTTGACTAATGAAAACTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCAATAAAAGAAACAAAGTTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTACAGGAGTCTCAACTTGAAATGCGCGCATTATTACTTCATTTAAGACCTTTAGGGCTAAAAG
ATAAATCACTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTGCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCAAATGGAACAAAAGTCACAGTGGAATTATTTAACAAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAGCAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTATCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.931

99.713

0.917