Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RES6_RS06220 | Genome accession | NZ_CP084229 |
| Coordinates | 1246578..1247552 (+) | Length | 324 a.a. |
| NCBI ID | WP_037550626.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain SE3.8 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1241578..1252552
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RES6_RS06185 (RES6_006185) | rpmG | 1242010..1242159 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| RES6_RS06190 (RES6_006190) | - | 1242396..1242932 (+) | 537 | WP_037550637.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| RES6_RS06195 (RES6_006195) | - | 1242948..1244405 (+) | 1458 | WP_161517199.1 | rhomboid family intramembrane serine protease | - |
| RES6_RS06200 (RES6_006200) | - | 1244389..1244592 (+) | 204 | WP_037550632.1 | YqgQ family protein | - |
| RES6_RS06205 (RES6_006205) | - | 1244589..1245575 (+) | 987 | WP_037550630.1 | ROK family glucokinase | - |
| RES6_RS06210 (RES6_006210) | - | 1245575..1245898 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| RES6_RS06215 (RES6_006215) | - | 1245900..1246526 (+) | 627 | WP_037550628.1 | MBL fold metallo-hydrolase | - |
| RES6_RS06220 (RES6_006220) | comGA | 1246578..1247552 (+) | 975 | WP_037550626.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RES6_RS06225 (RES6_006225) | comGB | 1247524..1248588 (+) | 1065 | WP_161517201.1 | competence type IV pilus assembly protein ComGB | - |
| RES6_RS06230 (RES6_006230) | comGC | 1248602..1248922 (+) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RES6_RS06235 (RES6_006235) | comGD | 1248903..1249355 (+) | 453 | WP_226956186.1 | competence type IV pilus minor pilin ComGD | - |
| RES6_RS06240 (RES6_006240) | - | 1249336..1249635 (+) | 300 | WP_053024491.1 | hypothetical protein | - |
| RES6_RS11955 | - | 1249553..1250044 (+) | 492 | WP_037550614.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| RES6_RS06245 (RES6_006245) | - | 1250204..1250722 (+) | 519 | WP_085060036.1 | shikimate kinase | - |
| RES6_RS06250 (RES6_006250) | gcvT | 1250911..1252002 (+) | 1092 | WP_053026662.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37123.10 Da Isoelectric Point: 8.4405
>NTDB_id=610200 RES6_RS06220 WP_037550626.1 1246578..1247552(+) (comGA) [Staphylococcus haemolyticus strain SE3.8]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPLNFNNLEQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPLNFNNLEQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=610200 RES6_RS06220 WP_037550626.1 1246578..1247552(+) (comGA) [Staphylococcus haemolyticus strain SE3.8]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTTTTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGGTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACTTAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTTTTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGGTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACTTAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.944 |
99.691 |
0.657 |
| comGA | Staphylococcus aureus N315 |
65.944 |
99.691 |
0.657 |