Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   I6G24_RS01090 Genome accession   NZ_CP084189
Coordinates   124262..124963 (+) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis strain FDAARGOS_867     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 119262..129963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G24_RS01075 (I6G24_01070) - 121656..122564 (+) 909 WP_023164481.1 diacylglycerol kinase family protein -
  I6G24_RS01080 (I6G24_01075) - 122712..123398 (+) 687 WP_004255158.1 amino acid ABC transporter permease -
  I6G24_RS01085 (I6G24_01080) - 123398..124132 (+) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  I6G24_RS01090 (I6G24_01085) mecA 124262..124963 (+) 702 WP_004255173.1 adaptor protein MecA Regulator
  I6G24_RS01095 (I6G24_01090) - 124966..126297 (+) 1332 WP_023164480.1 glycosyltransferase family 4 protein -
  I6G24_RS01100 (I6G24_01095) sufC 126472..127242 (+) 771 WP_023164479.1 Fe-S cluster assembly ATPase SufC -
  I6G24_RS01105 (I6G24_01100) sufD 127377..128636 (+) 1260 WP_392390891.1 Fe-S cluster assembly protein SufD -
  I6G24_RS01110 (I6G24_01105) - 128636..129853 (+) 1218 WP_023164477.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=609925 I6G24_RS01090 WP_004255173.1 124262..124963(+) (mecA) [Lactococcus lactis strain FDAARGOS_867]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=609925 I6G24_RS01090 WP_004255173.1 124262..124963(+) (mecA) [Lactococcus lactis strain FDAARGOS_867]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTCGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996
  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97