Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   LB316_RS13235 Genome accession   NZ_CP084107
Coordinates   2673658..2674545 (-) Length   295 a.a.
NCBI ID   WP_229375438.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CC49/ST49-MSSA     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2668658..2679545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LB316_RS13205 (LB316_13200) - 2668666..2668758 (+) 93 WP_031927345.1 hypothetical protein -
  LB316_RS13210 (LB316_13205) - 2668866..2669363 (-) 498 WP_001065267.1 glutathione peroxidase -
  LB316_RS13215 (LB316_13210) - 2669373..2669633 (-) 261 WP_011382405.1 hypothetical protein -
  LB316_RS13220 (LB316_13215) - 2670015..2670128 (-) 114 WP_072468803.1 hypothetical protein -
  LB316_RS13225 (LB316_13220) - 2670798..2672798 (-) 2001 WP_000776724.1 ABC transporter permease -
  LB316_RS13230 (LB316_13225) - 2672795..2673550 (-) 756 WP_000923766.1 ABC transporter ATP-binding protein -
  LB316_RS13235 (LB316_13230) braS 2673658..2674545 (-) 888 WP_229375438.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LB316_RS13240 (LB316_13235) braR 2674556..2675221 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LB316_RS13245 (LB316_13240) - 2675247..2675447 (-) 201 WP_000604729.1 hypothetical protein -
  LB316_RS13250 (LB316_13245) - 2675645..2677069 (+) 1425 WP_000948999.1 alkaline phosphatase -
  LB316_RS13255 (LB316_13250) - 2677139..2677249 (+) 111 WP_001791296.1 hypothetical protein -
  LB316_RS13260 (LB316_13255) - 2677352..2677807 (-) 456 WP_000106183.1 MarR family winged helix-turn-helix transcriptional regulator -
  LB316_RS13265 (LB316_13260) - 2678053..2678814 (-) 762 WP_000323444.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34035.28 Da        Isoelectric Point: 6.0874

>NTDB_id=609597 LB316_RS13235 WP_229375438.1 2673658..2674545(-) (braS) [Staphylococcus aureus strain CC49/ST49-MSSA]
MTFLKSITQEIAIVIVIFSLFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKHSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=609597 LB316_RS13235 WP_229375438.1 2673658..2674545(-) (braS) [Staphylococcus aureus strain CC49/ST49-MSSA]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTTCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATCGATAATTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAACATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986