Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   RBAU_RS02000 Genome accession   NC_022075
Coordinates   432180..432299 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis UCMB5033     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 427180..437299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBAU_RS01985 (RBAU_0372) - 428792..429475 (+) 684 WP_007410267.1 response regulator transcription factor -
  RBAU_RS01990 (RBAU_0373) - 429462..430895 (+) 1434 WP_020953885.1 ATP-binding protein -
  RBAU_RS01995 (RBAU_0374) rapC 431048..432196 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  RBAU_RS02000 (RBAU_0375) phrC 432180..432299 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  RBAU_RS20720 - 432447..432542 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  RBAU_RS02005 (RBAU_0376) - 432637..434001 (-) 1365 WP_007410272.1 aspartate kinase -
  RBAU_RS02010 (RBAU_0378) ceuB 434415..435368 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  RBAU_RS02015 (RBAU_0379) - 435358..436305 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  RBAU_RS02020 (RBAU_0380) - 436299..437057 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=60957 RBAU_RS02000 WP_003156334.1 432180..432299(+) (phrC) [Bacillus velezensis UCMB5033]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=60957 RBAU_RS02000 WP_003156334.1 432180..432299(+) (phrC) [Bacillus velezensis UCMB5033]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment