Detailed information NTG0060956

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RBAU_RS01995
• Genome accession: NC_022075
• Coordinates: 431048..432196 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis UCMB5033
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 426048..437196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBAU_RS01975 (RBAU_0370)	-	426469..427152 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
RBAU_RS01980 (RBAU_0371)	-	427167..428579 (-)	1413	WP_007410266.1	ABC transporter permease	-
RBAU_RS01985 (RBAU_0372)	-	428792..429475 (+)	684	WP_007410267.1	response regulator transcription factor	-
RBAU_RS01990 (RBAU_0373)	-	429462..430895 (+)	1434	WP_020953885.1	ATP-binding protein	-
RBAU_RS01995 (RBAU_0374)	rapC	431048..432196 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
RBAU_RS02000 (RBAU_0375)	phrC	432180..432299 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
RBAU_RS20720	-	432447..432542 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
RBAU_RS02005 (RBAU_0376)	-	432637..434001 (-)	1365	WP_007410272.1	aspartate kinase	-
RBAU_RS02010 (RBAU_0378)	ceuB	434415..435368 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
RBAU_RS02015 (RBAU_0379)	-	435358..436305 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
RBAU_RS02020 (RBAU_0380)	-	436299..437057 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=60956 RBAU_RS01995 WP_007410270.1 431048..432196(+) (rapC) [Bacillus velezensis UCMB5033]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=60956 RBAU_RS01995 WP_007410270.1 431048..432196(+) (rapC) [Bacillus velezensis UCMB5033]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568