Detailed information NTG0609526

Bioinformatically predicted

Overview

• Name: pilJ
• Type: Machinery gene
• Locus tag: Dongsha4_RS13540
• Genome accession: NZ_CP084098
• Coordinates: 3154971..3157727 (-)
• Length: 918 a.a.
• NCBI ID: WP_330202883.1
• Uniprot ID: -
• Organism: Cyanobacterium sp. Dongsha4
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3149971..3162727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Dongsha4_RS13515 (Dongsha4_13510)	-	3150481..3150986 (+)	506	Protein_2664	IS1 family transposase	-
Dongsha4_RS13520 (Dongsha4_13515)	-	3151404..3151622 (+)	219	Protein_2665	IS1 family transposase	-
Dongsha4_RS13525 (Dongsha4_13520)	-	3151756..3153483 (+)	1728	WP_330202881.1	ABC transporter ATP-binding protein	-
Dongsha4_RS13535 (Dongsha4_13530)	-	3154119..3154883 (-)	765	WP_330202882.1	MlaE family lipid ABC transporter permease subunit	-
Dongsha4_RS13540 (Dongsha4_13535)	pilJ	3154971..3157727 (-)	2757	WP_330202883.1	methyl-accepting chemotaxis protein	Machinery gene
Dongsha4_RS13545 (Dongsha4_13540)	-	3157793..3158329 (-)	537	WP_330202884.1	chemotaxis protein CheW	-
Dongsha4_RS13550 (Dongsha4_13545)	pilH	3158576..3158941 (-)	366	WP_330202885.1	response regulator	Machinery gene
Dongsha4_RS13555 (Dongsha4_13550)	hpnH	3159132..3160145 (-)	1014	WP_330202886.1	adenosyl-hopene transferase HpnH	-
Dongsha4_RS13560 (Dongsha4_13555)	murA	3160231..3161493 (-)	1263	WP_330205441.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
Dongsha4_RS13565 (Dongsha4_13560)	ruvX	3162248..3162679 (-)	432	WP_330202887.1	Holliday junction resolvase RuvX	-

Sequence

Protein

• Length: 918 a.a.
• Molecular weight: 101199.50 Da
• Isoelectric Point: 3.8298

>NTDB_id=609526 Dongsha4_RS13540 WP_330202883.1 3154971..3157727(-) (pilJ) [Cyanobacterium sp. Dongsha4]
MVSETDYQERFKQARTAYLEGDLAEASLITDGIMDDYPDDPSAFLLKGHIHLRQQEYDLAQVNYQKVLDLTDHQDLVTLA
KQGLAEIEEDSEDQSLYPPEVEEPDFDDEVEEIGDDDDDNWTSSIQFDSIDWDIDDLEEEEIEDPTLQQNSPFDQSFSKN
SSNPSPTLGKSEKRAGQKSGEDDEQDEDDTAANFIDSSLDEPDFDDGLNLDSASNDLLSFDFDNADIDYSQFESDSNDDD
LNQDEMQDTGAPTFVVSSEDEPELSDLEQMLTGETGFLNDLDDDLGDYSSQLEPLTAGRTSTNTGLNLEDENMPLVPEGE
EDLFFAPDELDDIPDIDADELPVSSIFTKDNKSDQVFPNIIETDENVFDSDFDNEITGSFSFDTDKINLDLEEDISVSSS
LGDISGISSSIAINPEVEVPQGKLAKYYNFSLFTKQLVHGGVTGVITFVIVLMVSLFQGGVRNIDNTTVTTTESGGETTQ
QTQETKETQKIPLPFSRTLLLSLIAGISGGACTIAMGYLMTNHIKRYTNDLQNHFESIYQGDYEVKATVYSQDEFGTLAA
GFNQMTKMIYTTTTEARKRAEETERAREDLQRQVIRLLDDVEGASRGDLTVQAEVTADVLGAVADAFNVTITNLRKIVKQ
VQQAAVQVNKASTDSEVFARNQSSDALRMAEELAVTLNSVQMMTDSIQRVAENAREAEEVARSSSVTALKGGDAVERTVA
GILQIRETVSETTRKVKRLAEASQQISTIVAVISQISSRTNLLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSLQ
EIEQIVLQIQTETGSVMTAMEEGIQQVRDVTERSEQAKRALEDIIQVSNRIDALVRSITADTDEQRENSRGVAKVMQAVE
LTAQATSQESQRVAGSLQNLVGIAKDLISSVERFRVDD

Nucleotide

• Length: 2757 bp

>NTDB_id=609526 Dongsha4_RS13540 WP_330202883.1 3154971..3157727(-) (pilJ) [Cyanobacterium sp. Dongsha4]
ATGGTATCAGAAACCGATTATCAAGAAAGATTTAAACAAGCTCGTACCGCTTATTTAGAAGGAGATCTAGCAGAAGCGTC
CTTAATTACTGATGGTATTATGGATGATTATCCAGATGATCCTAGTGCATTTCTACTGAAAGGTCATATTCACCTACGAC
AACAAGAATATGATTTAGCTCAAGTTAATTATCAAAAAGTCTTGGACTTAACAGATCATCAAGATTTGGTGACATTAGCT
AAACAAGGATTAGCAGAAATAGAAGAAGATAGCGAAGATCAATCTTTGTATCCCCCAGAGGTAGAAGAGCCAGATTTTGA
TGATGAAGTGGAAGAAATCGGTGACGATGATGATGATAATTGGACAAGTAGTATTCAATTTGACAGTATTGATTGGGATA
TAGATGATTTAGAAGAAGAAGAAATAGAAGACCCCACTCTACAGCAAAATTCTCCCTTTGATCAAAGTTTTTCTAAAAAT
TCCAGTAATCCCTCCCCTACATTGGGTAAAAGCGAAAAACGTGCGGGGCAAAAATCAGGGGAAGATGATGAACAAGATGA
AGATGATACCGCCGCTAATTTTATAGACTCCTCTTTAGATGAGCCTGATTTTGACGATGGTCTAAATTTAGATAGTGCAT
CCAATGACTTGTTGAGCTTTGATTTTGATAATGCGGACATAGATTATAGTCAATTTGAAAGTGATTCTAATGATGACGAC
CTCAATCAAGATGAAATGCAAGATACAGGGGCGCCCACTTTTGTGGTGTCTAGTGAAGATGAACCCGAATTGAGCGATTT
AGAACAAATGTTGACGGGGGAGACAGGCTTCCTTAATGATTTAGATGATGACTTAGGAGATTACAGTTCCCAGTTAGAAC
CTTTAACTGCCGGTAGAACTTCGACAAATACGGGGTTAAATTTGGAGGATGAGAATATGCCTCTTGTACCCGAAGGAGAA
GAAGATTTGTTTTTTGCTCCTGATGAGTTAGATGATATTCCTGACATCGACGCTGATGAGTTGCCTGTTTCTAGTATTTT
CACAAAGGATAATAAATCAGATCAGGTTTTCCCCAACATCATAGAAACAGATGAGAATGTTTTTGATAGTGATTTTGATA
ATGAGATTACGGGGAGTTTTTCTTTTGACACAGATAAAATTAATTTAGATTTAGAAGAAGATATAAGTGTTTCTTCGTCT
TTAGGGGATATTTCTGGCATATCTTCCTCTATTGCCATTAATCCAGAAGTAGAAGTTCCCCAAGGAAAACTTGCCAAATA
TTATAATTTTTCCCTATTCACTAAACAATTAGTACATGGTGGTGTTACAGGGGTTATCACTTTTGTGATAGTCTTGATGG
TTAGTTTATTTCAGGGGGGAGTTAGGAATATAGACAATACAACTGTAACTACTACTGAATCGGGTGGTGAAACAACACAA
CAGACTCAAGAAACAAAGGAAACTCAAAAAATACCATTACCTTTTTCTCGGACATTGTTGTTAAGTTTAATCGCTGGTAT
TAGTGGGGGAGCTTGTACCATAGCAATGGGTTATTTGATGACTAACCATATTAAACGCTATACTAATGACTTGCAAAATC
ACTTTGAATCCATTTATCAGGGTGATTATGAGGTCAAAGCAACGGTTTATTCTCAAGACGAATTTGGTACTTTGGCCGCA
GGTTTTAATCAGATGACGAAAATGATTTATACCACTACGACGGAGGCGAGAAAGAGGGCTGAAGAGACAGAAAGGGCAAG
AGAAGATCTACAAAGGCAGGTTATTCGTCTTCTTGATGATGTGGAAGGAGCTTCTAGGGGTGATTTAACGGTACAAGCGG
AGGTAACAGCAGACGTATTAGGGGCGGTAGCAGATGCTTTCAACGTGACTATTACTAACTTGCGGAAAATCGTTAAACAA
GTACAACAGGCGGCGGTACAAGTGAACAAAGCGAGTACTGATAGTGAGGTGTTTGCTCGAAATCAATCGAGTGATGCGTT
GCGAATGGCGGAAGAATTGGCGGTTACTTTAAATTCTGTTCAGATGATGACAGATTCAATTCAGAGGGTGGCAGAAAACG
CAAGAGAAGCCGAAGAGGTGGCTCGTTCCTCTAGCGTTACGGCTTTAAAGGGTGGTGATGCGGTAGAAAGAACTGTTGCC
GGTATTTTGCAGATTAGGGAAACAGTGTCAGAAACAACCCGTAAGGTAAAAAGATTGGCGGAGGCATCTCAACAAATTTC
AACGATTGTTGCTGTAATCTCACAGATTTCTTCTCGTACTAACCTATTAGCTTTAAATGCTTCGATTCAGGCGGCAAGGG
CAGGAGAGGCAGGAAGAGGATTTGCGATCGTTGCTGATGAAGTACGACAGTTAGCAGATAGGTCTGCAAAATCATTGCAA
GAAATTGAACAAATTGTATTACAAATTCAAACAGAAACTGGTTCAGTTATGACAGCGATGGAAGAAGGTATTCAACAGGT
AAGAGATGTAACCGAGAGGTCAGAACAGGCAAAACGAGCATTGGAAGATATTATTCAAGTATCTAATCGTATTGATGCCT
TGGTGCGATCGATTACAGCAGATACTGATGAGCAGAGAGAAAATTCCAGAGGAGTAGCAAAAGTAATGCAGGCGGTAGAA
TTAACAGCTCAAGCAACTTCTCAAGAATCTCAGAGGGTGGCTGGTTCTCTGCAAAATTTGGTTGGCATTGCTAAAGATTT
GATTTCTTCTGTAGAACGTTTTAGAGTTGATGATTAA

Domains

Predicted by InterproScan.

• Methyl-accepting chemotaxis protein (MCP) signalling domain (MCPsignal) (699-880)

• HAMP domain (HAMP) (520-569)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilJ	Synechocystis sp. PCC 6803	47.418	100	0.49