Detailed information NTG0060935

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EL269_RS11475
• Genome accession: NZ_AP018935
• Coordinates: 2208382..2209491 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain HU-GS5823
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2203382..2214491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL269_RS11450 (SAGS_2190)	-	2203754..2204593 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
EL269_RS11455 (SAGS_2191)	pgsA	2204593..2205135 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EL269_RS11460 (SAGS_2192)	yfmH	2205258..2206541 (-)	1284	WP_000217754.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EL269_RS11465 (SAGS_2193)	yfmF	2206543..2207787 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EL269_RS11470 (SAGS_2194)	yaaA	2208026..2208379 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
EL269_RS11475 (SAGS_2195)	recF	2208382..2209491 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
EL269_RS11480 (SAGS_2196)	-	2209503..2210369 (-)	867	WP_000398683.1	GRP family sugar transporter	-
EL269_RS11485 (SAGS_2197)	-	2210425..2211087 (-)	663	WP_001865840.1	helix-turn-helix domain-containing protein	-
EL269_RS11490 (SAGS_2198)	guaB	2211162..2212643 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
EL269_RS11495 (SAGS_2199)	-	2212800..2213285 (-)	486	WP_001034427.1	arginine repressor	-
EL269_RS11500 (SAGS_2200)	-	2213295..2213975 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=60935 EL269_RS11475 WP_000264863.1 2208382..2209491(+) (recF) [Streptococcus agalactiae strain HU-GS5823]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=60935 EL269_RS11475 WP_000264863.1 2208382..2209491(+) (recF) [Streptococcus agalactiae strain HU-GS5823]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444