Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LCH18_RS12120 Genome accession   NZ_CP083947
Coordinates   2484538..2484921 (-) Length   127 a.a.
NCBI ID   WP_004694493.1    Uniprot ID   A0A7H8SES6
Organism   Acinetobacter johnsonii strain CSUSB1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2479538..2489921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LCH18_RS12105 (LCH18_12105) - 2481477..2483549 (-) 2073 WP_224466982.1 methyl-accepting chemotaxis protein -
  LCH18_RS12110 (LCH18_12110) - 2483600..2484136 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  LCH18_RS12115 (LCH18_12115) - 2484142..2484510 (-) 369 WP_004694491.1 response regulator -
  LCH18_RS12120 (LCH18_12120) pilG 2484538..2484921 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  LCH18_RS12125 (LCH18_12125) - 2485202..2485840 (+) 639 WP_087010454.1 hypothetical protein -
  LCH18_RS12130 (LCH18_12130) - 2485898..2487025 (+) 1128 WP_224466984.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14184.23 Da        Isoelectric Point: 4.8722

>NTDB_id=608763 LCH18_RS12120 WP_004694493.1 2484538..2484921(-) (pilG) [Acinetobacter johnsonii strain CSUSB1]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFDALSKIAQANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=608763 LCH18_RS12120 WP_004694493.1 2484538..2484921(-) (pilG) [Acinetobacter johnsonii strain CSUSB1]
ATGGACGATAAATTCCAGAATCTAAAAGTAATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACACTATT
GCAACGTGAAGGTTGTGAAGTGGTGACTGCAGTCGATGGTTTTGATGCATTGTCAAAAATTGCTCAAGCCAATCCTGATA
TCGTATTTGTCGACATTATGATGCCACGACTAGATGGTTATCAAACGTGTGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCTGTCGTAATGCTCTCTAGCAAAGATGGTCTATTTGACCAAGCCAAAGGGCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAGCCGTTTAGTAAAGATGAATTATTAAATGCGATTCGTAATCACGTTTCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SES6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

39.316

92.126

0.362