Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   KE3_RS05770 Genome accession   NC_021900
Coordinates   1141047..1141487 (-) Length   146 a.a.
NCBI ID   WP_043895256.1    Uniprot ID   -
Organism   Streptococcus lutetiensis 033     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136047..1146487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS05750 (KE3_1173) - 1136049..1136729 (-) 681 WP_020916921.1 response regulator transcription factor -
  KE3_RS05755 (KE3_1174) - 1136732..1137367 (-) 636 WP_020916922.1 GTP pyrophosphokinase family protein -
  KE3_RS05760 (KE3_1175) rcrQ 1137467..1139239 (-) 1773 WP_020916923.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05765 (KE3_1176) rcrP 1139229..1141043 (-) 1815 WP_020916924.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05770 (KE3_1177) rcrR 1141047..1141487 (-) 441 WP_043895256.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KE3_RS05775 (KE3_1178) - 1141632..1142042 (-) 411 WP_020916926.1 peptide deformylase -
  KE3_RS10880 - 1142039..1142251 (-) 213 WP_228380533.1 GNAT family N-acetyltransferase -
  KE3_RS10885 - 1142233..1142547 (-) 315 WP_228380475.1 hypothetical protein -
  KE3_RS05785 (KE3_1179) gdhA 1142705..1144054 (-) 1350 WP_043895060.1 NADP-specific glutamate dehydrogenase -
  KE3_RS05790 - 1144290..1144787 (+) 498 WP_043895061.1 HdeD family acid-resistance protein -
  KE3_RS05795 (KE3_1181) queF 1144824..1145315 (-) 492 WP_020916929.1 preQ(1) synthase -
  KE3_RS05800 (KE3_1182) queE 1145465..1146184 (-) 720 Protein_1105 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17066.63 Da        Isoelectric Point: 9.3549

>NTDB_id=60831 KE3_RS05770 WP_043895256.1 1141047..1141487(-) (rcrR) [Streptococcus lutetiensis 033]
MRDKDLFSQFRYFINLMENRVHELGEQHGVENLAGPQGFAVLYLRENEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IEVVPSEVDKRYKRVVLTELGKAKSKGIDAFHTAIHKQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=60831 KE3_RS05770 WP_043895256.1 1141047..1141487(-) (rcrR) [Streptococcus lutetiensis 033]
ATGCGAGACAAAGATTTGTTTTCACAATTTAGATACTTTATTAATTTGATGGAGAATCGGGTACATGAGCTCGGTGAGCA
GCATGGTGTTGAAAATCTCGCTGGTCCGCAGGGATTTGCAGTTCTTTATTTACGTGAGAATGAAGACAAAGAAGTTTTCA
TCAAGGACATTGAACGTAAGCTTAAGATTTCAAAATCTGTGACCAGTAATTTGATTAAACGAATGGAGAAGAATGGCTTT
ATTGAGGTGGTTCCGTCGGAGGTTGATAAGCGTTATAAGCGTGTCGTCTTGACTGAGCTGGGTAAAGCAAAATCCAAAGG
CATCGATGCTTTTCATACTGCTATTCATAAGCAAATTTTTGATGGTATTAGCCGTGAAGAGCTAGAAATTTCTGGTCGTG
TTTTTGATCGTATTTTGAAAAACTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

53.846

97.945

0.527

Multiple sequence alignment