Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   KE3_RS05765 Genome accession   NC_021900
Coordinates   1139229..1141043 (-) Length   604 a.a.
NCBI ID   WP_020916924.1    Uniprot ID   A0AB33AM14
Organism   Streptococcus lutetiensis 033     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1133927..1154853 1139229..1141043 within 0


Gene organization within MGE regions


Location: 1133927..1154853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS05740 (KE3_1171) - 1133927..1134772 (+) 846 WP_020916919.1 aldo/keto reductase -
  KE3_RS05745 (KE3_1172) - 1134814..1136040 (-) 1227 WP_020916920.1 sensor histidine kinase -
  KE3_RS05750 (KE3_1173) - 1136049..1136729 (-) 681 WP_020916921.1 response regulator transcription factor -
  KE3_RS05755 (KE3_1174) - 1136732..1137367 (-) 636 WP_020916922.1 GTP pyrophosphokinase family protein -
  KE3_RS05760 (KE3_1175) rcrQ 1137467..1139239 (-) 1773 WP_020916923.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05765 (KE3_1176) rcrP 1139229..1141043 (-) 1815 WP_020916924.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05770 (KE3_1177) rcrR 1141047..1141487 (-) 441 WP_043895256.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KE3_RS05775 (KE3_1178) - 1141632..1142042 (-) 411 WP_020916926.1 peptide deformylase -
  KE3_RS10880 - 1142039..1142251 (-) 213 WP_228380533.1 GNAT family N-acetyltransferase -
  KE3_RS10885 - 1142233..1142547 (-) 315 WP_228380475.1 hypothetical protein -
  KE3_RS05785 (KE3_1179) gdhA 1142705..1144054 (-) 1350 WP_043895060.1 NADP-specific glutamate dehydrogenase -
  KE3_RS05790 - 1144290..1144787 (+) 498 WP_043895061.1 HdeD family acid-resistance protein -
  KE3_RS05795 (KE3_1181) queF 1144824..1145315 (-) 492 WP_020916929.1 preQ(1) synthase -
  KE3_RS05800 (KE3_1182) queE 1145465..1146184 (-) 720 Protein_1105 7-carboxy-7-deazaguanine synthase QueE -
  KE3_RS05805 (KE3_1184) queD 1146177..1146623 (-) 447 WP_020916930.1 6-carboxytetrahydropterin synthase QueD -
  KE3_RS05810 queC 1146623..1147276 (-) 654 Protein_1107 7-cyano-7-deazaguanine synthase QueC -
  KE3_RS05815 (KE3_1185) - 1147441..1149210 (-) 1770 WP_020916931.1 ABC transporter ATP-binding protein -
  KE3_RS05820 (KE3_1186) - 1149213..1150952 (-) 1740 WP_020916932.1 ABC transporter ATP-binding protein -
  KE3_RS05825 (KE3_1187) - 1151060..1151755 (-) 696 WP_020916933.1 hypothetical protein -
  KE3_RS05830 (KE3_1188) - 1151783..1153651 (-) 1869 WP_020916934.1 ABC-F family ATP-binding cassette domain-containing protein -
  KE3_RS05835 (KE3_1189) - 1153648..1154853 (-) 1206 WP_020916935.1 CCA tRNA nucleotidyltransferase -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67041.98 Da        Isoelectric Point: 5.7821

>NTDB_id=60830 KE3_RS05765 WP_020916924.1 1139229..1141043(-) (rcrP) [Streptococcus lutetiensis 033]
MLKIFKRLTAKEIIMMIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNLDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVITKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMILMLIFLLMMVMPKQRMIQKLTDKLNSITRESLTGIRVVRAYNAESYQDGKFAKANDNVTNFNLFIN
RSMALMSPVMTSISSGMTLAIYWIGAFLIEDIAIPKDPTKIAGAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIIVFFILP
RAVVAAGRINEVLDTKPSVTYPEESKAQPAEKGSVEFDDVSFRYSEHSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDASEGTIKVDGVDVRDYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGDSNSSPLDDDKMWEALDLAQGKDFVES
KEGQLKAKVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=60830 KE3_RS05765 WP_020916924.1 1139229..1141043(-) (rcrP) [Streptococcus lutetiensis 033]
ATGTTAAAAATTTTTAAACGTTTAACGGCAAAAGAAATCATCATGATGATTATTGCCGTCTTATTTGTGTGTTTGAATGT
TTTCTTGGATTTAAAAATTCCAGATTACATGTCTGATATCACATCTTTACTCTCAACTCAAGGAACAAAAGCAAAAGATA
TTTTTGCTTGGAATCTAGATGCCCCAGGTATGCGTATGGTCTTGCTTTCTTTAGGAAGTTTTGCAGCCTCTGTGGTTGTC
GGATTCTTAGCCGCACGCATCGCAGCAAGTTTCAGTACGCGTTTGCGTGATGATATTTTCCATAGTGTTTTGGACTTTTC
AGATGCGGAAATTAAGAAATTTTCAATTCCAAGTCTTTTAACACGTACAACAAATGACATTACTCAAATTCAGTTGGTCT
TTACCATGGGACTTCAAGTTATTACCAAAGGACCAATTATGGCAATCTGGGCTATTACGAAGATTGCTGATAAAAACCAT
GAGTGGTTGATGGTGCTGGTTGTAGCAGTGGCTGTCATGATTTTAATGTTGATTTTCTTGCTCATGATGGTAATGCCAAA
ACAACGCATGATTCAAAAATTAACGGATAAATTGAACAGTATTACACGTGAATCTTTGACTGGTATTCGTGTTGTTCGTG
CTTACAATGCCGAAAGTTATCAAGATGGTAAATTTGCTAAAGCCAATGATAACGTGACAAACTTTAACCTCTTTATCAAC
CGTTCAATGGCTTTGATGTCACCAGTTATGACAAGTATTTCAAGCGGGATGACTTTGGCAATTTATTGGATTGGTGCTTT
CCTGATTGAAGATATTGCTATTCCAAAAGACCCAACTAAGATTGCTGGTGCCATGCAAGATAAGGTAAATATCTTCTCAG
ATATGGTGGTTTATTCCTCATATGCCATGCAAGTTGTTATTGGTTTTATGATGATGATTATCGTTTTCTTCATTCTTCCC
CGTGCGGTTGTCGCTGCAGGTCGTATTAATGAAGTCTTGGATACGAAGCCATCTGTTACTTATCCTGAAGAAAGTAAAGC
TCAGCCGGCCGAAAAAGGTTCTGTTGAATTTGATGACGTGTCTTTCCGCTACAGCGAGCATTCGGAAGCTGTTTTGGAAC
ATGTTTCCTTTAAGGCTAAAGCAGGTGATACGGTTGCCTTTATCGGATCAACAGGTTCTGGTAAATCTACTCTAGTTAAT
TTGATTCCTCGTTTCTATGATGCAAGTGAAGGAACAATCAAAGTTGACGGTGTTGACGTTCGTGATTACGATCATGACAC
CCTTCACAAGATTGTTGGTTACATTCCGCAAAAAGCTGTGCTCTTTAGTGGAGACATTGCTTCAAATATGGACATGGGTG
ACAGCAATAGTTCACCGCTTGATGATGATAAGATGTGGGAAGCACTTGATTTGGCACAAGGTAAAGATTTCGTTGAAAGT
AAAGAGGGTCAACTAAAAGCTAAAGTCTCCCAAGGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGCTTGGCGATTGC
GCGTGCCCTTGCTCGTAAACCTGAAATTATCATCTTTGATGATTCATTCTCAGCGCTTGATTATAAGACTGACCGAATCC
TTCGTTCTCAATTGAAAGAACGTACAGCTGACATGACTAAGTTGATTGTTGCCCAACGTATTTCAACAATCATGGATGCT
GATCAGATCTTAGTCTTGGATGAAGGTAAAGTAGTTGGTCAAGGTACTCACGAAGAATTGCTTGCAAATAATGAAGTTTA
TCGTGAAATTGCCTATTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.273

100

0.674


Multiple sequence alignment