Detailed information NTG0607976

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD37_RS22680
• Genome accession: NZ_CP100966
• Coordinates: 4784027..4785052 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET350
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4779027..4790052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD37_RS22660 (NMD37_22540)	metJ	4780088..4780405 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD37_RS22665 (NMD37_22545)	yiiX	4780589..4781197 (+)	609	WP_000877403.1	YiiX family permuted papain-like enzyme	-
NMD37_RS22670 (NMD37_22550)	rpmE	4781258..4781470 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD37_RS22675 (NMD37_22555)	priA	4781673..4783871 (+)	2199	WP_223375127.1	primosomal protein N'	Machinery gene
NMD37_RS22680 (NMD37_22560)	cytR	4784027..4785052 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD37_RS22685 (NMD37_22565)	ftsN	4785144..4786103 (+)	960	WP_000068837.1	cell division protein FtsN	-
NMD37_RS22690 (NMD37_22570)	hslV	4786196..4786726 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD37_RS22695 (NMD37_22575)	hslU	4786736..4788067 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD37_RS22700 (NMD37_22580)	menA	4788134..4789060 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD37_RS22705 (NMD37_22585)	rraA	4789153..4789638 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=607976 NMD37_RS22680 WP_000644904.1 4784027..4785052(+) (cytR) [Escherichia coli strain ET350]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=607976 NMD37_RS22680 WP_000644904.1 4784027..4785052(+) (cytR) [Escherichia coli strain ET350]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628