Detailed information NTG0607798

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: LAZ98_RS02020
• Genome accession: NZ_CP083764
• Coordinates: 399345..400493 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DMB07
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 394345..405493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAZ98_RS02000 (LAZ98_02000)	-	394745..395428 (-)	684	WP_224443505.1	ABC transporter ATP-binding protein	-
LAZ98_RS02005 (LAZ98_02005)	-	395443..396876 (-)	1434	WP_224443506.1	ABC transporter permease	-
LAZ98_RS02010 (LAZ98_02010)	-	397089..397772 (+)	684	WP_014416901.1	response regulator transcription factor	-
LAZ98_RS02015 (LAZ98_02015)	-	397759..399186 (+)	1428	WP_106067998.1	HAMP domain-containing sensor histidine kinase	-
LAZ98_RS02020 (LAZ98_02020)	rapC	399345..400493 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
LAZ98_RS02025 (LAZ98_02025)	phrC	400477..400596 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
LAZ98_RS02030 (LAZ98_02030)	-	400746..400856 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
LAZ98_RS02035 (LAZ98_02035)	-	400936..402300 (-)	1365	WP_017419273.1	aspartate kinase	-
LAZ98_RS02040 (LAZ98_02040)	ceuB	402714..403667 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
LAZ98_RS02045 (LAZ98_02045)	-	403657..404604 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
LAZ98_RS02050 (LAZ98_02050)	-	404598..405356 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=607798 LAZ98_RS02020 WP_003156336.1 399345..400493(+) (rapC) [Bacillus velezensis strain DMB07]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=607798 LAZ98_RS02020 WP_003156336.1 399345..400493(+) (rapC) [Bacillus velezensis strain DMB07]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568