Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   K9B11_RS05150 Genome accession   NZ_CP083728
Coordinates   1032860..1033429 (+) Length   189 a.a.
NCBI ID   WP_224434020.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MR254     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1027860..1038429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9B11_RS05115 (K9B11_05115) - 1029073..1029345 (-) 273 WP_001790097.1 lactococcin 972 family bacteriocin -
  K9B11_RS05120 (K9B11_05120) - 1029355..1029456 (-) 102 WP_001790623.1 hypothetical protein -
  K9B11_RS14480 (K9B11_05125) - 1029995..1030072 (-) 78 WP_099112139.1 putative holin-like toxin -
  K9B11_RS05130 (K9B11_05130) - 1030373..1030975 (-) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  K9B11_RS05135 (K9B11_05135) - 1030990..1031166 (-) 177 WP_000214898.1 YkvS family protein -
  K9B11_RS05140 (K9B11_05140) - 1031365..1032351 (+) 987 WP_000668820.1 lipoate--protein ligase -
  K9B11_RS05145 (K9B11_05145) - 1032432..1032650 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  K9B11_RS05150 (K9B11_05150) comK/comK1 1032860..1033429 (+) 570 WP_224434020.1 competence protein ComK Regulator
  K9B11_RS05165 (K9B11_05165) - 1033916..1035427 (-) 1512 WP_000414177.1 bifunctional metallophosphatase/5'-nucleotidase -
  K9B11_RS05170 (K9B11_05170) - 1035566..1036924 (-) 1359 WP_000021864.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22582.78 Da        Isoelectric Point: 9.4726

>NTDB_id=607525 K9B11_RS05150 WP_224434020.1 1032860..1033429(+) (comK/comK1) [Staphylococcus aureus strain MR254]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNHKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=607525 K9B11_RS05150 WP_224434020.1 1032860..1033429(+) (comK/comK1) [Staphylococcus aureus strain MR254]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCATAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.471

100

0.995
  comK/comK1 Staphylococcus aureus N315

99.471

100

0.995