Detailed information NTG0607405

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD45_RS22155
• Genome accession: NZ_CP100941
• Coordinates: 4586549..4587574 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET625
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4581549..4592574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD45_RS22135 (NMD45_21940)	metJ	4582610..4582927 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD45_RS22140 (NMD45_21945)	yiiX	4583111..4583719 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD45_RS22145 (NMD45_21950)	rpmE	4583780..4583992 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD45_RS22150 (NMD45_21955)	priA	4584195..4586393 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
NMD45_RS22155 (NMD45_21960)	cytR	4586549..4587574 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD45_RS22160 (NMD45_21965)	ftsN	4587666..4588625 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD45_RS22165 (NMD45_21970)	hslV	4588718..4589248 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD45_RS22170 (NMD45_21975)	hslU	4589258..4590589 (+)	1332	WP_370605343.1	HslU--HslV peptidase ATPase subunit	-
NMD45_RS22175 (NMD45_21980)	menA	4590656..4591582 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD45_RS22180 (NMD45_21985)	rraA	4591675..4592160 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD45_RS22185 (NMD45_21990)	zapB	4592245..4592490 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=607405 NMD45_RS22155 WP_000644904.1 4586549..4587574(+) (cytR) [Escherichia coli strain ET625]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=607405 NMD45_RS22155 WP_000644904.1 4586549..4587574(+) (cytR) [Escherichia coli strain ET625]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628