Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K9864_RS05680 Genome accession   NZ_CP083436
Coordinates   1095351..1095542 (+) Length   63 a.a.
NCBI ID   WP_014417408.1    Uniprot ID   I2C3H7
Organism   Bacillus velezensis strain HC-8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1090351..1100542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9864_RS05650 (K9864_05605) argF 1091202..1092173 (+) 972 WP_014417404.1 ornithine carbamoyltransferase -
  K9864_RS05655 (K9864_05610) - 1092249..1092428 (+) 180 WP_003155070.1 YjzC family protein -
  K9864_RS05660 (K9864_05615) - 1092465..1092650 (-) 186 WP_007409129.1 YjzD family protein -
  K9864_RS05665 (K9864_05620) - 1092911..1093645 (+) 735 WP_014417405.1 hypothetical protein -
  K9864_RS05670 (K9864_05625) - 1093728..1094294 (+) 567 WP_032863798.1 hypothetical protein -
  K9864_RS05675 (K9864_05630) med 1094385..1095338 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  K9864_RS05680 (K9864_05635) comZ 1095351..1095542 (+) 192 WP_014417408.1 ComZ family protein Regulator
  K9864_RS05685 (K9864_05640) - 1095571..1095789 (-) 219 WP_007409123.1 hypothetical protein -
  K9864_RS05690 (K9864_05645) - 1095956..1096894 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  K9864_RS05695 (K9864_05650) fabF 1096917..1098155 (+) 1239 WP_014417409.1 beta-ketoacyl-ACP synthase II -
  K9864_RS05700 (K9864_05655) - 1098238..1099023 (+) 786 WP_014417410.1 DUF2268 domain-containing protein -
  K9864_RS05705 (K9864_05660) - 1099197..1100183 (+) 987 WP_014417411.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=605772 K9864_RS05680 WP_014417408.1 1095351..1095542(+) (comZ) [Bacillus velezensis strain HC-8]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEIIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=605772 K9864_RS05680 WP_014417408.1 1095351..1095542(+) (comZ) [Bacillus velezensis strain HC-8]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATAATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794