Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | LAE75_RS01000 | Genome accession | NZ_CP083378 |
| Coordinates | 165810..166463 (+) | Length | 217 a.a. |
| NCBI ID | WP_224027415.1 | Uniprot ID | - |
| Organism | Campylobacter coli strain C203112 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 145243..184368 | 165810..166463 | within | 0 |
Gene organization within MGE regions
Location: 145243..184368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LAE75_RS00870 (LAE75_00830) | legB | 145243..146205 (-) | 963 | WP_224027467.1 | 4,6-dehydratase LegB | - |
| LAE75_RS00875 (LAE75_00835) | - | 146205..146426 (-) | 222 | Protein_164 | flagellin | - |
| LAE75_RS00880 | - | 146523..146696 (-) | 174 | Protein_165 | hypothetical protein | - |
| LAE75_RS00885 (LAE75_00845) | - | 147165..148826 (-) | 1662 | WP_224027408.1 | hypothetical protein | - |
| LAE75_RS00890 (LAE75_00850) | - | 148829..149023 (-) | 195 | WP_002782214.1 | hypothetical protein | - |
| LAE75_RS00895 (LAE75_00855) | - | 149004..149408 (-) | 405 | WP_002796938.1 | hypothetical protein | - |
| LAE75_RS00900 (LAE75_00860) | - | 149408..150442 (-) | 1035 | WP_224027409.1 | DUF5309 family protein | - |
| LAE75_RS00905 (LAE75_00865) | - | 150714..151214 (+) | 501 | WP_060789942.1 | hypothetical protein | - |
| LAE75_RS00910 (LAE75_00870) | - | 151201..151512 (+) | 312 | WP_060789941.1 | hypothetical protein | - |
| LAE75_RS00915 | - | 151787..152032 (-) | 246 | WP_002810242.1 | hypothetical protein | - |
| LAE75_RS00920 (LAE75_00875) | - | 152194..155511 (-) | 3318 | WP_224027410.1 | hypothetical protein | - |
| LAE75_RS00925 | - | 155524..156567 (-) | 1044 | WP_224027411.1 | hypothetical protein | - |
| LAE75_RS00930 (LAE75_00885) | - | 156827..157207 (-) | 381 | WP_032582824.1 | hypothetical protein | - |
| LAE75_RS00935 (LAE75_00890) | - | 157218..157865 (-) | 648 | WP_002784021.1 | hypothetical protein | - |
| LAE75_RS00940 (LAE75_00895) | - | 157855..158058 (-) | 204 | WP_052780024.1 | hypothetical protein | - |
| LAE75_RS00945 (LAE75_00900) | - | 158051..159589 (-) | 1539 | WP_060794082.1 | hypothetical protein | - |
| LAE75_RS00950 (LAE75_00905) | - | 159570..159842 (-) | 273 | WP_002781524.1 | hypothetical protein | - |
| LAE75_RS00955 (LAE75_00910) | - | 159832..161124 (-) | 1293 | WP_052795874.1 | terminase large subunit domain-containing protein | - |
| LAE75_RS00960 (LAE75_00915) | - | 161121..161507 (-) | 387 | WP_002825868.1 | terminase small subunit | - |
| LAE75_RS00965 (LAE75_00920) | - | 161507..161887 (-) | 381 | WP_002788333.1 | hypothetical protein | - |
| LAE75_RS00970 (LAE75_00925) | - | 162057..162557 (-) | 501 | WP_224027412.1 | hypothetical protein | - |
| LAE75_RS00975 (LAE75_00930) | - | 162568..163569 (-) | 1002 | WP_224027413.1 | hypothetical protein | - |
| LAE75_RS00980 (LAE75_00935) | - | 163566..163865 (-) | 300 | WP_002861657.1 | hypothetical protein | - |
| LAE75_RS00985 (LAE75_00940) | - | 163971..164204 (-) | 234 | WP_072235911.1 | hypothetical protein | - |
| LAE75_RS00990 (LAE75_00945) | - | 164315..164986 (+) | 672 | WP_052780014.1 | LexA family transcriptional regulator | - |
| LAE75_RS00995 (LAE75_00950) | - | 165017..165790 (+) | 774 | WP_224027414.1 | hypothetical protein | - |
| LAE75_RS01000 (LAE75_00955) | CJE0566 | 165810..166463 (+) | 654 | WP_224027415.1 | DNA/RNA non-specific endonuclease | Regulator |
| LAE75_RS01005 (LAE75_00960) | - | 166491..167321 (+) | 831 | WP_032582836.1 | DNA-processing protein DprA | - |
| LAE75_RS01010 (LAE75_00965) | - | 167318..167920 (+) | 603 | WP_032582837.1 | phosphoribosyltransferase | - |
| LAE75_RS01015 (LAE75_00970) | - | 167947..168717 (-) | 771 | WP_139884813.1 | SEL1-like repeat protein | - |
| LAE75_RS01020 | - | 168721..169413 (-) | 693 | WP_223207056.1 | hypothetical protein | - |
| LAE75_RS01025 (LAE75_00980) | - | 169566..169838 (+) | 273 | WP_002783985.1 | hypothetical protein | - |
| LAE75_RS01030 (LAE75_00985) | - | 170420..170689 (+) | 270 | WP_002783984.1 | hypothetical protein | - |
| LAE75_RS01035 (LAE75_00990) | - | 170680..170934 (+) | 255 | WP_057993461.1 | hypothetical protein | - |
| LAE75_RS01040 (LAE75_00995) | - | 170931..171083 (+) | 153 | WP_002795985.1 | hypothetical protein | - |
| LAE75_RS01045 (LAE75_01000) | - | 171076..171273 (-) | 198 | WP_002810107.1 | hypothetical protein | - |
| LAE75_RS01050 (LAE75_01005) | - | 171416..171598 (+) | 183 | WP_052773987.1 | hypothetical protein | - |
| LAE75_RS01055 | - | 171595..172359 (+) | 765 | WP_072224827.1 | phage antirepressor KilAC domain-containing protein | - |
| LAE75_RS01060 (LAE75_01020) | - | 172349..173203 (+) | 855 | WP_139884808.1 | lambda exonuclease family protein | - |
| LAE75_RS01065 (LAE75_01025) | - | 173205..173939 (+) | 735 | WP_057038120.1 | hypothetical protein | - |
| LAE75_RS01070 (LAE75_01030) | - | 173939..174634 (+) | 696 | WP_002783960.1 | hypothetical protein | - |
| LAE75_RS01075 (LAE75_01035) | - | 174615..174893 (+) | 279 | WP_224027468.1 | hypothetical protein | - |
| LAE75_RS01080 (LAE75_01040) | - | 174874..175626 (+) | 753 | WP_224027416.1 | site-specific DNA-methyltransferase | - |
| LAE75_RS01085 (LAE75_01045) | - | 175662..175955 (+) | 294 | WP_002873572.1 | hypothetical protein | - |
| LAE75_RS01090 (LAE75_01050) | - | 175965..176198 (+) | 234 | WP_002782536.1 | hypothetical protein | - |
| LAE75_RS01095 (LAE75_01055) | - | 176195..176572 (+) | 378 | WP_002782538.1 | hypothetical protein | - |
| LAE75_RS01100 (LAE75_01065) | - | 176721..176966 (+) | 246 | WP_070234833.1 | hypothetical protein | - |
| LAE75_RS01105 (LAE75_01070) | - | 177008..177163 (+) | 156 | WP_002826691.1 | hypothetical protein | - |
| LAE75_RS01110 (LAE75_01075) | - | 177310..177990 (+) | 681 | WP_224027417.1 | antA/AntB antirepressor family protein | - |
| LAE75_RS01115 (LAE75_01080) | - | 177995..178414 (+) | 420 | WP_060787578.1 | YopX family protein | - |
| LAE75_RS01120 (LAE75_01085) | - | 178401..178805 (+) | 405 | WP_002811738.1 | hypothetical protein | - |
| LAE75_RS01125 (LAE75_01090) | - | 178849..179391 (+) | 543 | WP_060787577.1 | pentapeptide repeat-containing protein | - |
| LAE75_RS09065 (LAE75_01095) | - | 179384..179623 (+) | 240 | WP_002811742.1 | helix-turn-helix domain-containing protein | - |
| LAE75_RS01135 (LAE75_01100) | - | 179550..180749 (-) | 1200 | WP_002783946.1 | site-specific integrase | - |
| LAE75_RS01145 (LAE75_01110) | - | 181089..181427 (-) | 339 | WP_002785015.1 | F0F1 ATP synthase subunit C | - |
| LAE75_RS01150 (LAE75_01115) | - | 181671..183005 (+) | 1335 | WP_002785017.1 | sodium-dependent transporter | - |
| LAE75_RS01155 (LAE75_01120) | - | 183019..184368 (+) | 1350 | WP_002790562.1 | sodium-dependent transporter | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25551.18 Da Isoelectric Point: 9.7849
>NTDB_id=605483 LAE75_RS01000 WP_224027415.1 165810..166463(+) (CJE0566) [Campylobacter coli strain C203112]
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDESIKKYKVNCDKI
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDESIKKYKVNCDKI
Nucleotide
Download Length: 654 bp
>NTDB_id=605483 LAE75_RS01000 WP_224027415.1 165810..166463(+) (CJE0566) [Campylobacter coli strain C203112]
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCGCAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCGCAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
94.47 |
100 |
0.945 |
| CJE1441 | Campylobacter jejuni RM1221 |
89.767 |
99.078 |
0.889 |