Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | NLK52_RS00140 | Genome accession | NZ_CP100436 |
| Coordinates | 28474..29070 (+) | Length | 198 a.a. |
| NCBI ID | WP_003225425.1 | Uniprot ID | G4NT17 |
| Organism | Bacillus subtilis strain MEC_B298 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 23474..34070
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLK52_RS00110 (NLK52_00110) | sleL | 23475..24758 (-) | 1284 | WP_015382548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| NLK52_RS00115 (NLK52_00115) | yaaI | 24828..25373 (-) | 546 | WP_003226786.1 | isochorismatase family cysteine hydrolase | - |
| NLK52_RS00120 (NLK52_00120) | tadA | 25459..25944 (+) | 486 | WP_015482684.1 | tRNA adenosine(34) deaminase TadA | - |
| NLK52_RS00130 (NLK52_00130) | dnaX | 26421..28112 (+) | 1692 | WP_015482685.1 | DNA polymerase III subunit gamma/tau | - |
| NLK52_RS00135 (NLK52_00135) | ebfC | 28136..28459 (+) | 324 | WP_003225427.1 | YbaB/EbfC family nucleoid-associated protein | - |
| NLK52_RS00140 (NLK52_00140) | recR | 28474..29070 (+) | 597 | WP_003225425.1 | recombination protein RecR | Machinery gene |
| NLK52_RS00145 (NLK52_00145) | yaaL | 29088..29312 (+) | 225 | WP_003242387.1 | YaaL family protein | - |
| NLK52_RS00150 (NLK52_00150) | bofA | 29379..29642 (+) | 264 | WP_015382553.1 | sigma-K factor-processing regulator BofA | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21974.53 Da Isoelectric Point: 5.3504
>NTDB_id=605350 NLK52_RS00140 WP_003225425.1 28474..29070(+) (recR) [Bacillus subtilis strain MEC_B298]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=605350 NLK52_RS00140 WP_003225425.1 28474..29070(+) (recR) [Bacillus subtilis strain MEC_B298]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGACCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATTCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCTAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGACCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATTCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCTAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| recR | Streptococcus pneumoniae R6 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.041 |
98.99 |
0.515 |