Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   K3A98_RS13975 Genome accession   NZ_CP083259
Coordinates   2806408..2807073 (-) Length   221 a.a.
NCBI ID   WP_000697882.1    Uniprot ID   -
Organism   Staphylococcus aureus strain HL25274     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2801408..2812073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3A98_RS13955 (K3A98_002769) - 2801862..2801975 (-) 114 WP_078065515.1 hypothetical protein -
  K3A98_RS13960 (K3A98_002770) - 2802650..2804650 (-) 2001 WP_000776728.1 ABC transporter permease -
  K3A98_RS13965 (K3A98_002771) - 2804647..2805402 (-) 756 WP_000923762.1 ABC transporter ATP-binding protein -
  K3A98_RS13970 (K3A98_002772) braS 2805510..2806397 (-) 888 WP_000143414.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  K3A98_RS13975 (K3A98_002773) braR 2806408..2807073 (-) 666 WP_000697882.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  K3A98_RS13980 (K3A98_002774) - 2807099..2807299 (-) 201 WP_000604724.1 hypothetical protein -
  K3A98_RS13985 (K3A98_002775) - 2807497..2808921 (+) 1425 WP_031874997.1 alkaline phosphatase -
  K3A98_RS14500 - 2808981..2809082 (-) 102 WP_000731972.1 SE2200 family small protein -
  K3A98_RS13995 (K3A98_002777) - 2809204..2809659 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  K3A98_RS14000 (K3A98_002778) - 2809903..2810664 (-) 762 WP_000323454.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25392.47 Da        Isoelectric Point: 4.7893

>NTDB_id=605177 K3A98_RS13975 WP_000697882.1 2806408..2807073(-) (braR) [Staphylococcus aureus strain HL25274]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQDQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=605177 K3A98_RS13975 WP_000697882.1 2806408..2807073(-) (braR) [Staphylococcus aureus strain HL25274]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGACCAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTGTTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

98.643

100

0.986