Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   K3A98_RS09645 Genome accession   NZ_CP083259
Coordinates   1937430..1938416 (-) Length   328 a.a.
NCBI ID   WP_000959272.1    Uniprot ID   A0A0U1MHK6
Organism   Staphylococcus aureus strain HL25274     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1932430..1943416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3A98_RS09620 (K3A98_001912) - 1932690..1933037 (-) 348 WP_001242107.1 hypothetical protein -
  K3A98_RS09625 (K3A98_001913) - 1933223..1933816 (+) 594 WP_000224618.1 CYTH domain-containing protein -
  K3A98_RS09630 (K3A98_001914) - 1933920..1934285 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  K3A98_RS09635 (K3A98_001915) yjbH 1934308..1935114 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  K3A98_RS09640 (K3A98_001916) pepF 1935574..1937382 (-) 1809 WP_000082717.1 oligoendopeptidase F -
  K3A98_RS09645 (K3A98_001917) coiA 1937430..1938416 (-) 987 WP_000959272.1 competence protein CoiA Machinery gene
  K3A98_RS09650 (K3A98_001918) mecA 1938537..1939256 (-) 720 WP_001217728.1 adaptor protein MecA -
  K3A98_RS09655 (K3A98_001919) spxA 1939628..1940023 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  K3A98_RS09660 (K3A98_001920) trpS 1940318..1941307 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  K3A98_RS09665 (K3A98_001921) - 1941593..1943239 (+) 1647 WP_000277741.1 IS1182-like element ISSau3 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38875.53 Da        Isoelectric Point: 9.7548

>NTDB_id=605167 K3A98_RS09645 WP_000959272.1 1937430..1938416(-) (coiA) [Staphylococcus aureus strain HL25274]
MLVALNEEKERVLATTALRKIKYFCPVCGKQVILKRGLKVISHFAHKHLTEQKCFNNESFKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCYNKVKFNHFQSIFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=605167 K3A98_RS09645 WP_000959272.1 1937430..1938416(-) (coiA) [Staphylococcus aureus strain HL25274]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGATAAAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAACGGAACAAAAAT
GTTTTAATAATGAATCGTTTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAACCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTTATAATAAAGTGAAGTTCAATCATTTTCAAAGTATATTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-304)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1MHK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

95.732

100

0.957
  coiA Staphylococcus aureus MW2

95.427

100

0.954