Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   K8Z53_RS13075 Genome accession   NZ_CP083238
Coordinates   2437080..2437478 (-) Length   132 a.a.
NCBI ID   WP_142782153.1    Uniprot ID   -
Organism   Bacillus licheniformis strain 2709     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2432080..2442478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z53_RS13050 (K8Z53_12910) - 2432407..2433090 (-) 684 WP_003178799.1 amino acid ABC transporter permease -
  K8Z53_RS13055 (K8Z53_12915) - 2433102..2433977 (-) 876 WP_142782154.1 transporter substrate-binding domain-containing protein -
  K8Z53_RS13060 (K8Z53_12920) - 2434161..2434712 (+) 552 WP_061575968.1 NAD(P)H-dependent oxidoreductase -
  K8Z53_RS13065 (K8Z53_12925) - 2434809..2435535 (+) 727 Protein_2539 AAA family ATPase -
  K8Z53_RS13070 (K8Z53_12930) - 2435605..2437041 (+) 1437 WP_003178806.1 glycoside hydrolase family 1 protein -
  K8Z53_RS13075 (K8Z53_12935) nin/comJ 2437080..2437478 (-) 399 WP_142782153.1 competence protein ComJ Regulator
  K8Z53_RS13080 (K8Z53_12940) nucA/comI 2437496..2437942 (-) 447 WP_009330244.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  K8Z53_RS13085 (K8Z53_12945) - 2438310..2439570 (-) 1261 Protein_2543 methyl-accepting chemotaxis protein -
  K8Z53_RS13090 (K8Z53_12950) - 2439686..2440426 (-) 741 WP_003178817.1 ribonuclease YeeF family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15078.14 Da        Isoelectric Point: 5.1700

>NTDB_id=605096 K8Z53_RS13075 WP_142782153.1 2437080..2437478(-) (nin/comJ) [Bacillus licheniformis strain 2709]
MIKKWEAQEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTTGEHAVSFEALENTASSVEVRLNVQKQVLSFNRRVTVPF
EVLYDGVEIASVLSKKLTCDIPQGAYQLTCYTIMPDHSGTAQITYLLDFKQD

Nucleotide


Download         Length: 399 bp        

>NTDB_id=605096 K8Z53_RS13075 WP_142782153.1 2437080..2437478(-) (nin/comJ) [Bacillus licheniformis strain 2709]
TTGATCAAAAAGTGGGAAGCACAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAGAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGATATACAACGGGAGAGCACGCGGTCTCGTTTGAAGCTCTCGAAA
ACACGGCATCTTCAGTAGAAGTCCGTTTGAATGTCCAAAAACAGGTGCTCTCCTTCAACAGGCGCGTCACCGTTCCTTTC
GAAGTGCTTTATGACGGGGTCGAAATTGCAAGCGTTCTATCCAAGAAATTGACATGCGATATCCCGCAAGGCGCCTATCA
GCTGACATGCTATACAATAATGCCTGATCACAGCGGCACTGCACAGATCACCTATCTTCTCGATTTTAAACAGGATTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

50

96.97

0.485