Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K8Z23_RS05950 Genome accession   NZ_CP083129
Coordinates   1090123..1090581 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain NB-176     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1085123..1095581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z23_RS05925 (K8Z23_05915) - 1085529..1086827 (-) 1299 Protein_1157 MDR family MFS transporter -
  K8Z23_RS05930 (K8Z23_05920) - 1087231..1087731 (+) 501 WP_000708116.1 hypothetical protein -
  K8Z23_RS05935 (K8Z23_05925) - 1087764..1087997 (-) 234 WP_000939448.1 SPP1 phage holin family protein -
  K8Z23_RS05940 (K8Z23_05930) - 1088161..1088814 (+) 654 WP_000680815.1 diguanylate cyclase domain-containing protein -
  K8Z23_RS05945 (K8Z23_05935) - 1089429..1090091 (+) 663 WP_000922470.1 YkyA family protein -
  K8Z23_RS05950 (K8Z23_05940) kre 1090123..1090581 (-) 459 WP_000804864.1 YkyB family protein Regulator
  K8Z23_RS05955 (K8Z23_05945) - 1090723..1092297 (+) 1575 WP_017763557.1 Ppx/GppA family phosphatase -
  K8Z23_RS05960 (K8Z23_05950) - 1092406..1094514 (+) 2109 WP_000423552.1 polyphosphate kinase -
  K8Z23_RS05965 (K8Z23_05955) - 1094675..1094911 (-) 237 WP_000283738.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=604729 K8Z23_RS05950 WP_000804864.1 1090123..1090581(-) (kre) [Bacillus thuringiensis strain NB-176]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=604729 K8Z23_RS05950 WP_000804864.1 1090123..1090581(-) (kre) [Bacillus thuringiensis strain NB-176]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTGATTGCCGAAA
AAAAAGCAATTAAAGAAGGATTACACTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGGCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCGGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493