Detailed information NTG0603963

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NIK71_RS18250
• Genome accession: NZ_CP100305
• Coordinates: 3760178..3761491 (+)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain KBN10P05679
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3755178..3766491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIK71_RS18235 (NIK71_18235)	-	3755298..3757529 (-)	2232	WP_000052887.1	TonB-dependent siderophore receptor	-
NIK71_RS18240 (NIK71_18240)	tig	3757944..3759278 (+)	1335	WP_001198432.1	trigger factor	-
NIK71_RS18245 (NIK71_18245)	clpP	3759471..3760076 (+)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
NIK71_RS18250 (NIK71_18250)	clpX	3760178..3761491 (+)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NIK71_RS18255 (NIK71_18255)	-	3761639..3762355 (+)	717	WP_001269745.1	DUF2846 domain-containing protein	-
NIK71_RS18260 (NIK71_18260)	-	3762380..3762934 (-)	555	WP_000155519.1	DUF2059 domain-containing protein	-
NIK71_RS18265 (NIK71_18265)	-	3763076..3764602 (-)	1527	WP_253866805.1	fumarate hydratase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=603963 NIK71_RS18250 WP_001289250.1 3760178..3761491(+) (clpX) [Acinetobacter baumannii strain KBN10P05679]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=603963 NIK71_RS18250 WP_001289250.1 3760178..3761491(+) (clpX) [Acinetobacter baumannii strain KBN10P05679]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCAAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTAAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TATTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACGGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAACTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGTATTATCTACATTGATGAAATCGACAA
AATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATCCTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACGGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGCTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCAGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531