Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   HK74_RS07380 Genome accession   NC_021834
Coordinates   1397826..1398476 (-) Length   216 a.a.
NCBI ID   WP_002923759.1    Uniprot ID   A0A5T0IQG5
Organism   Campylobacter jejuni 32488     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1392826..1403476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HK74_RS07345 (M635_07300) - 1393204..1394208 (+) 1005 WP_079269915.1 hypothetical protein -
  HK74_RS07350 (M635_07305) tlyA 1394205..1394966 (+) 762 WP_002854799.1 TlyA family RNA methyltransferase -
  HK74_RS07355 (M635_07310) ribF 1394932..1395786 (+) 855 WP_002873780.1 bifunctional riboflavin kinase/FAD synthetase -
  HK74_RS07360 (M635_07315) cmoA 1395773..1396483 (+) 711 WP_002859101.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  HK74_RS07365 (M635_07320) - 1396473..1396694 (-) 222 WP_002859102.1 EexN family lipoprotein -
  HK74_RS07370 (M635_07325) - 1396691..1397125 (-) 435 WP_002855128.1 EexN family lipoprotein -
  HK74_RS07375 (M635_07330) - 1397183..1397815 (-) 633 WP_002870070.1 trimeric intracellular cation channel family protein -
  HK74_RS07380 (M635_07335) CJE0566 1397826..1398476 (-) 651 WP_002923759.1 DNA/RNA non-specific endonuclease Regulator
  HK74_RS07385 (M635_07340) nth 1398473..1399099 (-) 627 WP_002852225.1 endonuclease III -
  HK74_RS07390 (M635_07345) peb4 1399180..1400001 (+) 822 WP_002852119.1 peptidylprolyl isomerase PEB4 -
  HK74_RS07395 (M635_07350) fbaA 1400001..1401065 (+) 1065 WP_002923762.1 class II fructose-bisphosphate aldolase -
  HK74_RS07400 (M635_07355) - 1401160..1402602 (+) 1443 WP_002875368.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25532.25 Da        Isoelectric Point: 9.9028

>NTDB_id=60349 HK74_RS07380 WP_002923759.1 1397826..1398476(-) (CJE0566) [Campylobacter jejuni 32488]
MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFED
DTNIPKKYRTTWSNYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLAFKFQSIEVLN
LVLYNKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=60349 HK74_RS07380 WP_002923759.1 1397826..1398476(-) (CJE0566) [Campylobacter jejuni 32488]
ATGAAAATTTTCATCTTTTTACTCACTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCTGTTGCTTATAAGGTAGAAGCTTCAAATTTGAAAGATAGACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTAATTATAAAAACAGTGGTTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAAATTTGGCTTTCAAATTCCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACAATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0IQG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.051

91.204

0.639
  CJE1441 Campylobacter jejuni RM1221

69.036

91.204

0.63

Multiple sequence alignment