Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   K8O90_RS10025 Genome accession   NZ_CP082881
Coordinates   1681675..1682325 (-) Length   216 a.a.
NCBI ID   WP_002842554.1    Uniprot ID   -
Organism   Campylobacter coli strain FDAARGOS_1465     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1676675..1687325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O90_RS09995 (K8O90_09935) - 1677469..1678473 (+) 1005 WP_052774074.1 hypothetical protein -
  K8O90_RS10000 (K8O90_09940) - 1678470..1679219 (+) 750 WP_002777566.1 TlyA family RNA methyltransferase -
  K8O90_RS10005 (K8O90_09945) - 1679188..1680024 (+) 837 WP_002780161.1 bifunctional riboflavin kinase/FAD synthetase -
  K8O90_RS10010 (K8O90_09950) cmoA 1680028..1680732 (+) 705 WP_002777561.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  K8O90_RS10015 (K8O90_09955) - 1680736..1680954 (-) 219 WP_002780165.1 EexN family lipoprotein -
  K8O90_RS10020 (K8O90_09960) - 1681033..1681665 (-) 633 WP_002780167.1 trimeric intracellular cation channel family protein -
  K8O90_RS10025 (K8O90_09965) CJE1441 1681675..1682325 (-) 651 WP_002842554.1 DNA/RNA non-specific endonuclease Regulator
  K8O90_RS10030 (K8O90_09970) nth 1682322..1682948 (-) 627 WP_002842552.1 endonuclease III -
  K8O90_RS10035 (K8O90_09975) - 1683031..1683852 (+) 822 WP_002777551.1 peptidylprolyl isomerase -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25064.81 Da        Isoelectric Point: 9.8547

>NTDB_id=603324 K8O90_RS10025 WP_002842554.1 1681675..1682325(-) (CJE1441) [Campylobacter coli strain FDAARGOS_1465]
MKLIIFLLAFTLHVFALEAYKPDKDFAPYFNPLNCSVVLDKFFYTNCYDYKLKGTKAVAYKVEASNLKEKQIKKRARFEV
DTNIPKKYRSTWSDYKNSGYTRGHIASNASFRFSKAAQTSVFLMSNITPQNAQVNATVWNEIEQRERSLAFKFQSVEVLN
LILYGKNPKFIKNGIAIPSSYVKIIKTSRFEECYEVPNNNIQSEEINDYKISCNKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=603324 K8O90_RS10025 WP_002842554.1 1681675..1682325(-) (CJE1441) [Campylobacter coli strain FDAARGOS_1465]
ATGAAACTTATCATCTTTTTATTAGCATTTACACTTCATGTTTTTGCTTTAGAAGCTTATAAGCCCGATAAAGATTTTGC
GCCTTATTTTAATCCTTTAAATTGCTCTGTTGTTTTGGATAAATTTTTTTATACCAATTGTTATGATTATAAACTCAAAG
GCACTAAAGCCGTAGCCTATAAAGTCGAAGCGTCCAATCTAAAAGAAAAACAGATCAAAAAACGAGCTCGCTTTGAAGTT
GACACAAATATCCCTAAAAAATACCGCAGTACTTGGAGTGATTATAAAAATAGTGGTTATACCCGAGGACATATAGCCTC
AAATGCTTCTTTTCGCTTTAGTAAAGCAGCACAAACATCGGTTTTTTTGATGAGTAATATCACTCCACAAAATGCACAAG
TTAATGCAACGGTTTGGAATGAAATCGAACAAAGAGAAAGAAGTCTTGCTTTTAAATTCCAAAGCGTTGAAGTGCTAAAT
CTAATACTTTATGGTAAAAATCCTAAATTTATTAAAAATGGCATTGCTATACCGAGTTCTTATGTTAAGATTATCAAAAC
TTCTCGGTTTGAAGAATGTTATGAAGTACCCAATAACAATATCCAGAGCGAAGAAATCAATGATTATAAAATTTCTTGCA
ATAAATTCTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(35-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

65.99

91.204

0.602
  CJE0566 Campylobacter jejuni RM1221

65.482

91.204

0.597