Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   K8O89_RS04990 Genome accession   NZ_CP082852
Coordinates   1110391..1111050 (-) Length   219 a.a.
NCBI ID   WP_019233615.1    Uniprot ID   -
Organism   Legionella anisa strain FDAARGOS_1480     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105391..1116050
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS04975 (K8O89_04975) - 1106869..1107441 (-) 573 WP_058388412.1 hypothetical protein -
  K8O89_RS04980 (K8O89_04980) - 1107450..1108160 (-) 711 WP_019233617.1 L,D-transpeptidase -
  K8O89_RS04985 (K8O89_04985) uvrC 1108420..1110282 (-) 1863 WP_058388413.1 excinuclease ABC subunit UvrC -
  K8O89_RS04990 (K8O89_04990) letA 1110391..1111050 (-) 660 WP_019233615.1 two-component system response regulator LetA Regulator
  K8O89_RS04995 (K8O89_04995) phhA 1111138..1111956 (-) 819 WP_019233614.1 phenylalanine 4-monooxygenase -
  K8O89_RS05000 (K8O89_05000) - 1112130..1113224 (+) 1095 WP_058388414.1 molybdopterin-binding protein -
  K8O89_RS05005 (K8O89_05005) cgtA 1113180..1114205 (-) 1026 WP_058388415.1 Obg family GTPase CgtA -
  K8O89_RS05010 (K8O89_05010) rpmA 1114350..1114628 (-) 279 WP_019233611.1 50S ribosomal protein L27 -
  K8O89_RS05015 (K8O89_05015) rplU 1114641..1114952 (-) 312 WP_019233610.1 50S ribosomal protein L21 -
  K8O89_RS05020 (K8O89_05020) - 1115228..1115899 (+) 672 WP_058388416.1 50S ribosomal protein L25/general stress protein Ctc -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24327.35 Da        Isoelectric Point: 5.0144

>NTDB_id=603043 K8O89_RS04990 WP_019233615.1 1110391..1111050(-) (letA) [Legionella anisa strain FDAARGOS_1480]
MIKVLIVDDHALVRMGIRRLLEDMSDVEVVADAESGEQALALVKKYSPDVVLLDMKMPGIDGWEVTRRLKKSNPHVKVIA
VTAMCSDVLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEKYLSAEIAQKVAINSLEEVQGSPFDVLSEREMQVMLMI
TSGMNVQEISDRLFLSTKTINGYRYRTFEKLGIKNDVELTYLALKHGIIENPIDLASED

Nucleotide


Download         Length: 660 bp        

>NTDB_id=603043 K8O89_RS04990 WP_019233615.1 1110391..1111050(-) (letA) [Legionella anisa strain FDAARGOS_1480]
TTGATTAAAGTACTAATTGTTGATGACCATGCATTGGTTCGAATGGGAATTCGACGATTACTCGAAGATATGTCAGATGT
TGAGGTAGTCGCTGATGCAGAAAGTGGTGAACAAGCTTTAGCATTAGTAAAAAAATATTCCCCAGATGTTGTTCTTTTAG
ATATGAAAATGCCCGGAATCGATGGGTGGGAAGTAACGCGTCGCCTGAAAAAATCAAATCCACACGTTAAGGTTATTGCT
GTAACTGCGATGTGTTCTGATGTGTTGCCTACTCGTGTTTTGCAATTAGGAGCTATGGGGTATCTGACGAAAGAATCGGG
TGCCGAAGAAATGGCTGCCGCAATCCGCAAAGTTGCAAAAGGGGAAAAGTACCTTAGTGCCGAAATCGCTCAAAAAGTAG
CGATTAATAGTTTAGAAGAAGTGCAAGGTTCGCCTTTTGATGTGTTATCTGAGCGTGAAATGCAAGTGATGTTGATGATT
ACCAGCGGCATGAATGTCCAGGAAATTAGTGATAGGCTTTTCCTGAGCACAAAAACAATTAATGGTTATCGTTATCGAAC
ATTTGAAAAATTAGGCATTAAAAATGATGTGGAGCTCACTTATTTGGCTTTAAAACACGGAATTATAGAAAATCCTATCG
ATCTGGCATCAGAAGATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-203)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

88.584

100

0.886
  letA Legionella pneumophila strain ERS1305867

88.584

100

0.886