Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   K8O89_RS01405 Genome accession   NZ_CP082852
Coordinates   305002..307740 (+) Length   912 a.a.
NCBI ID   WP_156415157.1    Uniprot ID   -
Organism   Legionella anisa strain FDAARGOS_1480     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 300002..312740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS01390 (K8O89_01390) - 300552..301631 (-) 1080 WP_019231987.1 hypothetical protein -
  K8O89_RS01395 (K8O89_01395) - 301774..303036 (-) 1263 WP_019231986.1 serine hydrolase -
  K8O89_RS01400 (K8O89_01400) gltX 303278..304693 (-) 1416 WP_019231985.1 glutamate--tRNA ligase -
  K8O89_RS01405 (K8O89_01405) letS 305002..307740 (+) 2739 WP_156415157.1 two-component system sensor histidine kinase LetS Regulator
  K8O89_RS01410 (K8O89_01410) - 307936..309174 (+) 1239 WP_019231983.1 6-phosphofructokinase -
  K8O89_RS01415 (K8O89_01415) pilA 309587..310018 (+) 432 WP_019231982.1 pilin Machinery gene
  K8O89_RS01420 (K8O89_01420) - 310090..310419 (+) 330 WP_019231981.1 BolA family transcriptional regulator -
  K8O89_RS01425 (K8O89_01425) - 310801..312201 (+) 1401 WP_019231980.1 APC family permease -
  K8O89_RS01430 (K8O89_01430) - 312298..312477 (-) 180 WP_019231979.1 Trm112 family protein -

Sequence


Protein


Download         Length: 912 a.a.        Molecular weight: 103179.75 Da        Isoelectric Point: 7.3539

>NTDB_id=603037 K8O89_RS01405 WP_156415157.1 305002..307740(+) (letS) [Legionella anisa strain FDAARGOS_1480]
MLKSIGIKYQLRITTLIPAFLVALLLAIFYNGLFGNDLKQHMSRLGEAYIRQLLPAAQYAMLRRDDRTLQGLINASTINP
EVIALAFYSSDGQLLAYRGGKHSLNKPFNPPKFTGDYIESKQINPFTINFIAPVTIPKFNLYSNSSFKNLLSPMATRADD
ILGWLSIDIDTRSMIIKRYQMLIVTIFITLFGLLMGLTIHYFLSKRIYLPISRLRRSMKQILRNEFETEIKTTSPGELGI
IEQGCAHLQKKHLETVRDLNQHIEVATEDLQQSLELLEEKNIELSLEKKKIEEKSRQKSEFIANMSHEIRTPMNGVIGFT
NVLLESKLDPLQLDYVKTIKTSAQDLLGIINDILDFSKIDAGKLHLDCIPLNIRHCIDEVLTLAAPNAHKKGIDLIPITD
INVPKIILGDPFRIKQFITNLVTNAVKFTDHGYVLVRTKVEQETDKDYTLCITITDTGLGISPEDQSKLFTAFNQADTSI
TRRYGGSGLGLVICKKLCEEMHVRITFTSELNKGSSFTAHVKVEKLVAYEIEKNQIHPFAHFKMLCFDDNSLHLEALCNG
LGYWGIQCVPVNSLNHLEKALENNKDCKIAFLNINKGYEQKIAKIISEHNYFPYVLISKWLINDYTAIGGQGFLYKPISI
QKLQDVIESLTSLENIEKPVNHELDSLREQLRFMHPDLLIAEDNPINKMLLNSLLGTHANMTSVDDGEMAVSACNDKKYD
LILLDLQMPKINGLEAARLIRQKSQLNRHTPIVLISANGSDVNSIDLKKAGVDYCLQKPIDEKQLLTQILRITDKAKHAA
IDWQLCIQKVSGNQALAEEFLARFVEELHKNREEFIQLMHDKNIKKLGEAAHKLHGACCFSGVPTLQKKVVHVEKLAVNA
ASIEELATPFAELIQSIDAVINEYENQKIRIN

Nucleotide


Download         Length: 2739 bp        

>NTDB_id=603037 K8O89_RS01405 WP_156415157.1 305002..307740(+) (letS) [Legionella anisa strain FDAARGOS_1480]
ATTTTGAAAAGCATTGGTATTAAGTATCAACTGAGAATTACTACCCTAATCCCAGCCTTTTTAGTCGCCCTGCTTCTCGC
TATTTTTTATAATGGACTATTCGGCAATGACCTAAAACAACATATGTCGCGTTTGGGGGAAGCCTATATCCGTCAATTGC
TTCCTGCAGCTCAATACGCCATGCTCCGACGCGATGATCGTACTTTACAAGGATTAATCAATGCTTCTACAATTAACCCA
GAAGTAATAGCTCTTGCCTTTTACAGTAGTGATGGACAATTACTAGCATATCGTGGTGGGAAACACTCGCTGAATAAACC
ATTTAATCCACCTAAATTTACAGGGGATTACATTGAAAGTAAGCAAATTAATCCGTTCACTATTAATTTCATCGCACCAG
TTACTATTCCTAAATTTAATCTTTACTCCAATTCATCCTTTAAGAACCTACTAAGTCCCATGGCTACTCGTGCAGATGAT
ATTTTAGGTTGGTTATCCATAGATATTGATACGCGATCTATGATCATAAAGCGCTATCAAATGCTCATAGTAACGATTTT
TATTACTCTATTTGGCTTGCTTATGGGATTAACCATCCACTATTTTCTCTCTAAGCGGATTTATTTACCCATTTCTCGTT
TACGTAGAAGTATGAAACAAATTTTGCGAAATGAATTCGAAACGGAAATAAAAACAACAAGCCCAGGTGAACTAGGTATT
ATTGAACAAGGTTGTGCCCATTTACAAAAAAAACACCTCGAAACAGTTCGTGATTTGAATCAGCATATTGAAGTTGCCAC
AGAGGATTTGCAGCAAAGTCTTGAGCTGTTAGAAGAAAAAAATATCGAGCTTTCACTCGAGAAGAAAAAAATAGAAGAAA
AAAGTCGACAAAAATCAGAATTTATTGCCAATATGAGCCATGAAATCCGTACACCAATGAACGGAGTAATTGGCTTTACT
AATGTTTTACTGGAAAGCAAACTTGATCCATTGCAATTGGATTATGTAAAAACGATAAAAACATCAGCTCAAGATTTATT
AGGAATAATTAACGACATTCTCGATTTTTCCAAAATCGATGCTGGAAAACTTCACCTAGATTGCATCCCATTAAATATTC
GTCATTGCATTGATGAAGTTCTTACACTCGCCGCACCGAATGCACATAAAAAAGGAATTGATTTAATCCCCATAACCGAT
ATTAATGTGCCCAAAATTATCTTGGGAGATCCCTTCAGAATAAAACAATTTATCACCAACTTGGTGACCAACGCCGTTAA
ATTTACAGATCATGGTTATGTGTTGGTTCGCACCAAAGTAGAACAGGAAACAGATAAAGATTACACTTTATGCATCACAA
TTACTGATACCGGTTTGGGTATTTCTCCCGAAGATCAAAGTAAATTGTTTACAGCATTTAACCAAGCGGATACAAGCATT
ACGCGACGTTATGGTGGTTCAGGCCTCGGTTTAGTTATTTGCAAAAAACTCTGTGAAGAAATGCATGTTCGGATTACATT
TACAAGTGAACTCAATAAAGGCTCTAGCTTTACTGCTCATGTCAAAGTCGAAAAGCTGGTTGCTTATGAAATAGAAAAAA
ACCAAATACACCCCTTCGCCCATTTCAAGATGCTGTGCTTTGACGATAATTCACTGCACCTGGAAGCTCTGTGTAATGGT
TTAGGTTATTGGGGAATACAATGCGTCCCTGTAAATTCGTTGAATCACCTTGAAAAAGCCCTAGAGAACAACAAAGACTG
TAAAATTGCTTTTCTCAATATTAATAAGGGCTACGAGCAAAAAATCGCTAAAATTATCTCAGAACATAATTATTTTCCTT
ATGTATTGATTTCCAAATGGCTTATTAATGATTACACCGCGATTGGTGGTCAAGGCTTTTTATATAAACCCATTAGTATT
CAAAAACTCCAAGACGTTATTGAATCACTTACTAGTCTGGAAAATATTGAAAAACCAGTCAATCATGAATTGGATAGCTT
AAGGGAGCAATTACGTTTTATGCATCCAGATTTGCTTATTGCCGAAGACAACCCCATTAATAAAATGCTTCTGAACTCTT
TATTAGGTACTCATGCAAACATGACCTCAGTTGATGATGGGGAGATGGCTGTATCTGCGTGCAATGACAAGAAATATGAC
TTGATTTTACTTGACTTACAAATGCCGAAAATAAATGGCTTAGAAGCAGCTCGACTCATTCGTCAAAAATCGCAACTGAA
CCGTCATACCCCCATAGTTTTAATTAGTGCGAATGGCAGTGATGTAAATAGTATTGATCTGAAAAAAGCAGGTGTGGACT
ATTGCTTACAAAAGCCTATAGATGAAAAACAATTACTTACACAAATTCTTCGTATTACAGATAAAGCAAAACATGCTGCA
ATCGATTGGCAATTATGCATACAAAAAGTATCGGGAAATCAAGCGCTTGCAGAAGAATTTCTTGCACGATTTGTCGAAGA
GCTCCATAAAAATCGGGAAGAATTCATTCAATTAATGCACGACAAAAACATTAAAAAATTAGGAGAAGCAGCACATAAAC
TTCATGGGGCATGTTGTTTTTCCGGTGTACCCACGTTACAGAAAAAAGTAGTCCATGTAGAAAAACTGGCTGTAAATGCT
GCTTCAATTGAAGAATTAGCCACCCCTTTTGCAGAGTTAATTCAAAGTATTGATGCAGTAATTAATGAGTACGAAAATCA
GAAAATAAGAATTAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

79.162

99.452

0.787