Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   K8B68_RS04380 Genome accession   NZ_CP082813
Coordinates   925117..926103 (+) Length   328 a.a.
NCBI ID   WP_223081772.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCAID OTT1-2021 (597/2)     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 920117..931103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8B68_RS04355 (K8B68_04355) opp4B 920329..921291 (+) 963 WP_000593421.1 oligopeptide ABC transporter permease -
  K8B68_RS04360 (K8B68_04360) opp4C 921303..922184 (+) 882 WP_223081771.1 oligopeptide ABC transporter permease -
  K8B68_RS04365 (K8B68_04365) trpS 922226..923215 (-) 990 WP_000448938.1 tryptophan--tRNA ligase -
  K8B68_RS04370 (K8B68_04370) spxA 923510..923905 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  K8B68_RS04375 (K8B68_04375) mecA 924277..924996 (+) 720 WP_001217728.1 adaptor protein MecA -
  K8B68_RS04380 (K8B68_04380) coiA 925117..926103 (+) 987 WP_223081772.1 competence protein CoiA Machinery gene
  K8B68_RS04385 (K8B68_04385) pepF 926151..927959 (+) 1809 WP_223081774.1 oligoendopeptidase F -
  K8B68_RS04390 (K8B68_04390) yjbH 928419..929225 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  K8B68_RS04395 (K8B68_04395) - 929248..929613 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  K8B68_RS04400 (K8B68_04400) - 929717..930310 (-) 594 WP_000224615.1 CYTH domain-containing protein -
  K8B68_RS04405 (K8B68_04405) - 930496..930843 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38835.46 Da        Isoelectric Point: 9.7732

>NTDB_id=602440 K8B68_RS04380 WP_223081772.1 925117..926103(+) (coiA) [Staphylococcus aureus strain SCAID OTT1-2021 (597/2)]
MLVALNEEKERVLATTALRKIKYFCPVCGKQVILKRGLKVISHFAHKHLTEQKCFNNESFKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSIFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKVINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=602440 K8B68_RS04380 WP_223081772.1 925117..926103(+) (coiA) [Staphylococcus aureus strain SCAID OTT1-2021 (597/2)]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGATAAAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAACGGAACAAAAAT
GTTTTAATAATGAATCGTTTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAACCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATATTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAAGTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

95.732

100

0.957
  coiA Staphylococcus aureus MW2

95.427

100

0.954