Detailed information NTG0602222

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: K7G42_RS10400
• Genome accession: NZ_CP082783
• Coordinates: 1971443..1972486 (-)
• Length: 347 a.a.
• NCBI ID: WP_003103717.1
• Uniprot ID: A0A0E2UQ99
• Organism: Streptococcus parauberis strain KRS02083
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1966443..1977486

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7G42_RS10375 (K7G42_10295)	rimI	1967142..1967558 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
K7G42_RS10380 (K7G42_10300)	tsaB	1967563..1968255 (-)	693	WP_037620071.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
K7G42_RS10385 (K7G42_10305)	-	1968528..1968758 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
K7G42_RS10390 (K7G42_10310)	rnjA	1968760..1970442 (+)	1683	WP_003107714.1	ribonuclease J1	-
K7G42_RS10395 (K7G42_10315)	amiF	1970508..1971443 (-)	936	WP_003105521.1	ABC transporter ATP-binding protein	Regulator
K7G42_RS10400 (K7G42_10320)	oppD	1971443..1972486 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
K7G42_RS10405 (K7G42_10325)	-	1972501..1973532 (-)	1032	WP_004347296.1	ABC transporter permease	-
K7G42_RS10410 (K7G42_10330)	-	1973542..1974456 (-)	915	WP_004347295.1	ABC transporter permease	-
K7G42_RS10415 (K7G42_10335)	-	1974532..1976190 (-)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38344.10 Da
• Isoelectric Point: 5.1351

>NTDB_id=602222 K7G42_RS10400 WP_003103717.1 1971443..1972486(-) (oppD) [Streptococcus parauberis strain KRS02083]
MTKEKVLSVKDLHVDFKTYAGAVKAIRNINFDLYKGETLAIVGESGSGKSVTTRTLMGLNAKNASITGDIDFKGKKLIEL
NEDEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENVSKSEALERALKLMNQVGIPNAEEHINDYPHMWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEEGSLESIPGTPPDLLNPPKGDAFAARNEYALDIDLEEEPPMFKVSDTHYAATWLL
DERAPQVTPPAPILKRWAKWNKKKGQI

Nucleotide

• Length: 1044 bp

>NTDB_id=602222 K7G42_RS10400 WP_003103717.1 1971443..1972486(-) (oppD) [Streptococcus parauberis strain KRS02083]
ATGACTAAAGAAAAAGTATTAAGTGTCAAAGACCTCCATGTTGATTTTAAAACATATGCTGGAGCTGTTAAGGCAATCCG
TAATATCAATTTTGATTTATATAAAGGTGAGACACTAGCCATTGTTGGTGAATCAGGTTCTGGTAAATCCGTTACGACAC
GGACTTTGATGGGGCTAAACGCTAAGAATGCAAGTATCACTGGAGATATTGATTTCAAAGGTAAGAAATTAATTGAGCTT
AATGAAGACGAATGGGTTAAAGTTCGTGGTAAAGAAATTGCCATGATTTTCCAAGATCCCATGACAAGTCTTGACCCTAC
AATGAAAATTGGCATGCAGATTGCAGAAGCGATTCTAATCCATGAAAATGTTTCTAAAAGTGAAGCTTTGGAACGTGCAT
TGAAATTGATGAATCAAGTTGGGATTCCAAATGCGGAAGAACATATCAATGATTATCCACATATGTGGTCTGGTGGTATG
CGTCAACGTGCTGTCATTGCTATTGCACTTGCTGCAAATCCAGAAATTTTAATTGCTGACGAACCTACAACTGCCCTAGA
CGTAACAATTCAGAACCAAATTTTGAAATTGATGAAAGGTTTGCAATCACAAATTTCTTCATCAATTATCTTTATCACCC
ATGACCTTGGGGTTGTGGCTGGTATGGCTGATCGTGTAGCTGTTATGTATGCAGGTAAAATTGTTGAATATGGTACAGTA
GATGAAGTTTTCTATAATCCACAACATCCCTACACATGGGGCCTTTTGAACTCTATGCCTACAACTGATACCGAAGAAGG
AAGCCTTGAATCTATTCCAGGGACACCTCCTGACCTGTTGAATCCTCCAAAAGGAGATGCCTTTGCTGCTCGTAATGAGT
ATGCCTTAGATATCGACTTGGAAGAGGAACCTCCTATGTTTAAAGTTTCTGATACACATTACGCTGCAACATGGTTGTTA
GATGAACGTGCACCACAAGTAACACCACCTGCACCAATTTTAAAACGTTGGGCTAAATGGAATAAGAAGAAAGGACAAAT
TTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

3D structure

• AlphaFold DB: A0A0E2UQ99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	77.746	99.712	0.775
amiE	Streptococcus salivarius strain HSISS4	56.083	97.118	0.545
amiE	Streptococcus thermophilus LMG 18311	55.786	97.118	0.542
amiE	Streptococcus thermophilus LMD-9	55.786	97.118	0.542