Detailed information NTG0602221

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: K7G42_RS10395
• Genome accession: NZ_CP082783
• Coordinates: 1970508..1971443 (-)
• Length: 311 a.a.
• NCBI ID: WP_003105521.1
• Uniprot ID: A0A2I8AI54
• Organism: Streptococcus parauberis strain KRS02083
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1965508..1976443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7G42_RS10370 (K7G42_10290)	tsaD	1966139..1967152 (-)	1014	WP_003105067.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
K7G42_RS10375 (K7G42_10295)	rimI	1967142..1967558 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
K7G42_RS10380 (K7G42_10300)	tsaB	1967563..1968255 (-)	693	WP_037620071.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
K7G42_RS10385 (K7G42_10305)	-	1968528..1968758 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
K7G42_RS10390 (K7G42_10310)	rnjA	1968760..1970442 (+)	1683	WP_003107714.1	ribonuclease J1	-
K7G42_RS10395 (K7G42_10315)	amiF	1970508..1971443 (-)	936	WP_003105521.1	ABC transporter ATP-binding protein	Regulator
K7G42_RS10400 (K7G42_10320)	oppD	1971443..1972486 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
K7G42_RS10405 (K7G42_10325)	-	1972501..1973532 (-)	1032	WP_004347296.1	ABC transporter permease	-
K7G42_RS10410 (K7G42_10330)	-	1973542..1974456 (-)	915	WP_004347295.1	ABC transporter permease	-
K7G42_RS10415 (K7G42_10335)	-	1974532..1976190 (-)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35205.16 Da
• Isoelectric Point: 6.5131

>NTDB_id=602221 K7G42_RS10395 WP_003105521.1 1970508..1971443(-) (amiF) [Streptococcus parauberis strain KRS02083]
MTEERKKLVELKNVSLTFNKGKSNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYEITDGEIIFNGVNITKL
KGKELHNFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTKTKEEREARVQELLDRVGLNKDHVTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQTERGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTRSLLSAIPEPDPDYERQRVAEIYDPSIELDGKEREMREITPGHFVFSTEEEAVAYKANSNK

Nucleotide

• Length: 936 bp

>NTDB_id=602221 K7G42_RS10395 WP_003105521.1 1970508..1971443(-) (amiF) [Streptococcus parauberis strain KRS02083]
ATGACTGAAGAACGTAAAAAATTAGTTGAACTAAAAAACGTTTCTTTAACCTTTAATAAAGGGAAAAGCAACGAAGTCAA
GGCCATTAATAATGTCAGTTTTGATATCTATGAAGGTGAAGTCTTTGGATTAGTTGGGGAATCAGGTTCTGGTAAAACAA
CAGTTGGCCGTGCTATCTTAAAACTTTATGAAATTACCGATGGCGAAATTATTTTCAATGGTGTAAATATCACTAAACTA
AAAGGAAAAGAACTTCATAATTTCCGTAAAGATGCACAAATGATTTTCCAAGATCCACAAGCAAGTCTTAATGGACGGAT
GAAAATTAGAGACATCGTTGCTGAAGGACTAGATATTCATGGTTTAACTAAAACAAAGGAAGAACGTGAAGCTCGTGTTC
AAGAACTACTTGACCGTGTTGGTTTGAATAAAGACCATGTGACTCGTTATCCACATGAATTTTCAGGAGGACAACGTCAA
CGTATTGGTATTGCCCGTGCCTTGGCTGTAAAACCCAAATTTATCATTGCTGATGAACCAATTTCTGCTTTGGACGTATC
TATCCAAGCACAGGTTGTTAACTTGATGCAAAAATTACAAACTGAACGTGGTTTAACCTACTTGTTTATCGCCCATGATT
TATCAATGGTTAAATACATTTCAGATCGTATTGGTGTTATGCACTGGGGTAAAATGTTAGAAATTGGGACATCTGAAGAT
GTTTATAATAACCCAATTCACCCATATACAAGAAGTCTCTTATCAGCTATTCCTGAACCAGACCCAGATTATGAACGCCA
ACGTGTTGCGGAAATTTATGATCCAAGTATTGAATTGGATGGAAAAGAACGTGAAATGCGTGAAATCACACCAGGTCACT
TCGTATTTTCAACAGAAGAAGAAGCAGTAGCTTACAAAGCAAATTCAAATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

3D structure

• AlphaFold DB: A0A2I8AI54

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.035	0.537
amiF	Streptococcus thermophilus LMG 18311	53.896	99.035	0.534
amiF	Streptococcus salivarius strain HSISS4	53.247	99.035	0.527