Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   K6959_RS14785 Genome accession   NZ_CP082780
Coordinates   3038451..3039581 (-) Length   376 a.a.
NCBI ID   WP_163242769.1    Uniprot ID   A0A6B3W333
Organism   Bacillus aquiflavi strain 3H-10     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3033451..3044581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6959_RS14760 (K6959_14760) dltD 3033867..3035045 (-) 1179 WP_163242179.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  K6959_RS14765 (K6959_14765) dltC 3035042..3035278 (-) 237 WP_163242178.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  K6959_RS14770 (K6959_14770) - 3035294..3035806 (-) 513 Protein_2979 MBOAT family O-acyltransferase -
  K6959_RS19320 - 3035837..3036115 (-) 279 WP_262421799.1 reverse transcriptase -
  K6959_RS19325 - 3036266..3036604 (-) 339 WP_262421800.1 reverse transcriptase domain-containing protein -
  K6959_RS19330 - 3036715..3036879 (-) 165 WP_246234996.1 reverse transcriptase domain-containing protein -
  K6959_RS19335 - 3036928..3037131 (-) 204 WP_246234998.1 hypothetical protein -
  K6959_RS14780 (K6959_14780) degU 3037681..3038364 (-) 684 WP_163242784.1 response regulator transcription factor Regulator
  K6959_RS14785 (K6959_14785) degS 3038451..3039581 (-) 1131 WP_163242769.1 sensor histidine kinase Regulator
  K6959_RS14790 (K6959_14790) - 3040188..3040823 (+) 636 WP_163242768.1 YigZ family protein -
  K6959_RS14795 (K6959_14795) - 3040902..3041906 (+) 1005 WP_223086878.1 LCP family protein -
  K6959_RS14800 (K6959_14800) - 3042009..3043115 (-) 1107 WP_223086879.1 glycosyltransferase family 4 protein -
  K6959_RS14805 (K6959_14805) - 3043626..3044219 (-) 594 WP_262421801.1 group II intron maturase-specific domain-containing protein -
  K6959_RS19340 - 3044224..3044379 (-) 156 WP_246234804.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 44281.98 Da        Isoelectric Point: 6.9301

>NTDB_id=602157 K6959_RS14785 WP_163242769.1 3038451..3039581(-) (degS) [Bacillus aquiflavi strain 3H-10]
MTLTKFNTKTLDQIIEKMMTEIRKYKDEIFRVSEKGWNDYEFLKEELTHVKERASYIIKDREKLDFQLHFVQKKLSEIGE
DVKGCTSEELLNQAQELQRHLKLNRQEEIQLQNRSDEIERQLLELKATIEQAEQFVLRISVVLTYLTNDIKQSGERIKER
THKQEIGLKMIDAQEEERKRLSREIHDGPAQMLANVLLRSDLIERIFRERSPEEAMDEIRSLKKMVRHTLHEVRRIIYDL
RPMPLEELGLISTLKKYFQTIEEYYKNIKISFISISNDKRLPIKYELALFRLIQESVQNALKHAYSTEIQVKLTIADGSI
SIVVNDNGKGFDLNKQQKSQSFGILGMKERVELLNGEISIDTQLDVGTSIRIQVPF

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=602157 K6959_RS14785 WP_163242769.1 3038451..3039581(-) (degS) [Bacillus aquiflavi strain 3H-10]
ATGACGTTAACAAAATTTAATACGAAGACCCTAGATCAAATAATAGAAAAAATGATGACAGAGATTAGAAAATATAAAGA
TGAAATTTTCCGTGTTAGTGAAAAGGGTTGGAATGATTATGAATTTCTTAAAGAAGAATTAACACATGTAAAGGAAAGGG
CTTCCTACATAATAAAGGATAGGGAGAAGCTCGATTTCCAACTTCATTTTGTCCAAAAGAAGCTTTCGGAAATAGGTGAG
GACGTTAAAGGATGCACTAGCGAGGAATTATTAAATCAAGCACAAGAGCTTCAAAGACATTTAAAATTAAATAGACAAGA
GGAAATACAACTGCAGAATCGAAGTGATGAGATTGAACGACAATTGTTGGAGTTAAAGGCAACAATAGAACAAGCGGAGC
AGTTTGTTTTACGAATTTCAGTCGTATTGACTTATTTGACTAACGATATAAAGCAATCGGGAGAAAGAATAAAAGAAAGA
ACGCATAAACAAGAGATTGGATTAAAAATGATTGATGCACAGGAAGAGGAACGAAAACGATTATCAAGAGAAATACATGA
CGGTCCGGCGCAAATGCTTGCAAACGTCCTCTTGCGCTCGGATTTAATTGAGCGTATTTTTCGGGAAAGAAGTCCAGAGG
AAGCAATGGATGAAATCCGCAGTTTGAAGAAGATGGTGCGTCATACACTACACGAGGTTCGCCGTATAATTTATGATTTG
CGCCCCATGCCTTTAGAAGAGCTAGGGTTAATTTCTACTTTAAAAAAATATTTTCAAACTATTGAGGAGTATTATAAAAA
TATTAAAATTTCGTTTATCTCTATTAGCAACGATAAACGGCTTCCAATTAAATATGAACTTGCGCTTTTTCGACTCATTC
AAGAATCGGTTCAAAATGCATTAAAACATGCTTATTCCACAGAAATCCAAGTAAAATTAACAATTGCTGACGGTAGTATA
TCTATCGTGGTGAACGATAACGGAAAAGGTTTTGACTTAAATAAACAACAGAAATCACAATCCTTTGGTATTTTAGGAAT
GAAGGAACGAGTCGAGCTTTTAAATGGGGAAATATCGATTGATACTCAACTCGATGTTGGAACAAGTATTCGGATTCAAG
TTCCATTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6B3W333

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

48.564

100

0.495