Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   K6959_RS10655 Genome accession   NZ_CP082780
Coordinates   2208995..2209780 (-) Length   261 a.a.
NCBI ID   WP_163239196.1    Uniprot ID   A0A6B3VXR4
Organism   Bacillus aquiflavi strain 3H-10     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2203995..2214780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6959_RS10635 (K6959_10635) yqiS 2204390..2205295 (-) 906 WP_223088363.1 phosphate butyryltransferase -
  K6959_RS10640 (K6959_10640) - 2205439..2207514 (-) 2076 WP_163239192.1 sigma-54-dependent Fis family transcriptional regulator -
  K6959_RS10645 (K6959_10645) - 2207658..2207900 (+) 243 WP_223086482.1 DUF2627 domain-containing protein -
  K6959_RS10650 (K6959_10650) - 2208095..2208814 (-) 720 WP_163239543.1 glycerophosphodiester phosphodiesterase -
  K6959_RS10655 (K6959_10655) spo0A 2208995..2209780 (-) 786 WP_163239196.1 sporulation transcription factor Spo0A Regulator
  K6959_RS10660 (K6959_10660) spoIVB 2210069..2211351 (-) 1283 Protein_2161 SpoIVB peptidase -
  K6959_RS10665 (K6959_10665) - 2211755..2212009 (-) 255 WP_163239200.1 hypothetical protein -
  K6959_RS10670 (K6959_10670) recN 2212138..2213826 (-) 1689 WP_223086484.1 DNA repair protein RecN Machinery gene
  K6959_RS10675 (K6959_10675) ahrC 2213846..2214295 (-) 450 WP_163239204.1 transcriptional regulator AhrC/ArgR -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 29410.14 Da        Isoelectric Point: 7.1865

>NTDB_id=602143 K6959_RS10655 WP_163239196.1 2208995..2209780(-) (spo0A) [Bacillus aquiflavi strain 3H-10]
MKKIKVFIVDDNRELVILLEEYLSKQNDLEVVGTAHNGQECLNMLERIEADVLLLDIIMPHLDGLAVLEKIRESKRPLPN
VIMLTAFGQEDVTKKAVELGASYFILKPFDMDNLASHIRQVSGKMNAIIKQTSTPYRTHTEEKPKNLDSSITSIIHEIGV
PAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTISMSKAK
PTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 786 bp        

>NTDB_id=602143 K6959_RS10655 WP_163239196.1 2208995..2209780(-) (spo0A) [Bacillus aquiflavi strain 3H-10]
GTGAAGAAAATTAAAGTTTTTATTGTTGATGACAATCGTGAATTAGTCATCCTATTAGAAGAATACTTATCTAAGCAAAA
TGATCTGGAAGTAGTCGGTACCGCACATAATGGTCAAGAATGTTTAAATATGCTTGAAAGAATCGAAGCGGATGTACTGC
TGTTAGATATTATTATGCCCCATTTAGATGGGCTTGCTGTATTAGAAAAAATACGTGAATCAAAAAGACCGCTTCCGAAT
GTCATTATGTTAACAGCCTTTGGTCAAGAAGATGTTACGAAAAAGGCAGTCGAACTTGGTGCTTCCTATTTTATCTTAAA
ACCATTTGATATGGATAATTTGGCAAGTCATATTAGACAAGTAAGCGGAAAAATGAATGCAATTATTAAACAAACTTCAA
CTCCTTATCGTACTCATACAGAAGAGAAACCGAAAAATTTAGATTCCAGTATTACGAGTATTATTCATGAAATAGGTGTT
CCTGCTCATATTAAAGGTTATCTTTATTTACGCGAAGCCATTTCAATGGTATACAATGATATCGAATTGTTAGGGTCAAT
AACAAAGGTGCTATACCCCGATATTGCTAAAAAATACAATACAACGGCAAGCCGTGTAGAACGGGCGATTCGTCATGCAA
TTGAAGTAGCATGGAGTCGAGGGAATATCGACTCTATTTCGTCTTTATTCGGTTACACAATCAGCATGTCTAAAGCAAAG
CCGACTAATTCAGAATTCATCGCAATGGTAGCCGATAAGCTGAGACTAGAACATAAAGCTTCTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(151-254)

Response regulator receiver domain (Response_reg)

(6-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B3VXR4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

76.779

100

0.785