Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   JSY00_RS09230 Genome accession   NZ_CP082778
Coordinates   1902715..1903974 (-) Length   419 a.a.
NCBI ID   WP_024379118.1    Uniprot ID   -
Organism   Streptococcus suis strain ID32098     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1897715..1908974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JSY00_RS09205 (JSY00_09205) dhaS 1897882..1898427 (-) 546 WP_014736432.1 dihydroxyacetone kinase transcriptional activator DhaS -
  JSY00_RS09210 (JSY00_09210) dhaK 1898575..1899564 (+) 990 WP_202847558.1 dihydroxyacetone kinase subunit DhaK -
  JSY00_RS09215 (JSY00_09215) dhaL 1899575..1900150 (+) 576 WP_024379121.1 dihydroxyacetone kinase subunit DhaL -
  JSY00_RS09220 (JSY00_09220) dhaM 1900147..1900521 (+) 375 WP_024379120.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  JSY00_RS09225 (JSY00_09225) - 1900567..1902420 (-) 1854 WP_099776993.1 proline--tRNA ligase -
  JSY00_RS09230 (JSY00_09230) eeP 1902715..1903974 (-) 1260 WP_024379118.1 RIP metalloprotease RseP Regulator
  JSY00_RS09235 (JSY00_09235) - 1903984..1904790 (-) 807 WP_204108382.1 phosphatidate cytidylyltransferase -
  JSY00_RS09240 (JSY00_09240) - 1904800..1905555 (-) 756 WP_013730586.1 isoprenyl transferase -
  JSY00_RS09245 (JSY00_09245) yajC 1905669..1905992 (-) 324 WP_002940126.1 preprotein translocase subunit YajC -
  JSY00_RS09250 (JSY00_09250) - 1906102..1907394 (-) 1293 WP_204108383.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45004.35 Da        Isoelectric Point: 5.0863

>NTDB_id=602122 JSY00_RS09230 WP_024379118.1 1902715..1903974(-) (eeP) [Streptococcus suis strain ID32098]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGILIFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHEGTEKSLTVTAEKVDDSYRIGISPILKTGFLDKIIGGFQQAGATAVIVVTALKNLIANF
DVKQLGGPIAIYSVSNQAAANGWVSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=602122 JSY00_RS09230 WP_024379118.1 1902715..1903974(-) (eeP) [Streptococcus suis strain ID32098]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGTCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGGAAGTTGATAACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGAATTCTAATATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGAGGGGACTGAAAAATC
GCTCACAGTTACTGCTGAGAAGGTTGACGATAGCTACCGAATTGGAATTTCACCGATTTTAAAAACTGGTTTCCTTGATA
AGATTATTGGGGGCTTCCAGCAAGCGGGTGCGACAGCAGTTATTGTTGTAACTGCCTTGAAAAACTTGATTGCCAATTTT
GATGTTAAGCAATTGGGTGGACCTATTGCCATTTATTCTGTCAGCAATCAGGCTGCTGCAAATGGTTGGGTTTCAGTCTT
TAACCTGATGGCTATGCTATCAATCAATATCGGTATTTTCAATCTTATCCCTATTCCAGCCTTGGATGGTGGGAAGATTG
TCATGAACATTCTAGAAGGTATTCGCAGAAAACCACTTAAACCAGAAACAGAATCCTATATCACGCTGGCAGGCGTTGCA
ATCATGGTTGTCCTCATGCTGGTCGTGACCTGGAATGATATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637

  eeP Streptococcus thermophilus LMD-9

63.333

100

0.635