Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | K7T73_RS00530 | Genome accession | NZ_CP082363 |
| Coordinates | 96837..99278 (+) | Length | 813 a.a. |
| NCBI ID | WP_063384353.1 | Uniprot ID | - |
| Organism | Bacillus badius strain NBPM-293 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 91837..104278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7T73_RS00515 (K7T73_00515) | - | 94735..95196 (+) | 462 | WP_063384355.1 | CtsR family transcriptional regulator | - |
| K7T73_RS00520 (K7T73_00520) | - | 95339..95761 (+) | 423 | WP_327809425.1 | UvrB/UvrC motif-containing protein | - |
| K7T73_RS00525 (K7T73_00525) | - | 95761..96816 (+) | 1056 | WP_041101837.1 | protein arginine kinase | - |
| K7T73_RS00530 (K7T73_00530) | clpC | 96837..99278 (+) | 2442 | WP_063384353.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| K7T73_RS00535 (K7T73_00535) | radA | 99413..100786 (+) | 1374 | WP_223662454.1 | DNA repair protein RadA | Machinery gene |
| K7T73_RS00540 (K7T73_00540) | - | 100899..101993 (+) | 1095 | WP_063384352.1 | PIN/TRAM domain-containing protein | - |
| K7T73_RS00545 (K7T73_00545) | ispD | 102007..102693 (+) | 687 | WP_063384351.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| K7T73_RS00550 (K7T73_00550) | ispF | 102713..103210 (+) | 498 | WP_063384350.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90540.21 Da Isoelectric Point: 6.0060
>NTDB_id=601802 K7T73_RS00530 WP_063384353.1 96837..99278(+) (clpC) [Bacillus badius strain NBPM-293]
MMFGRFTERAQKVLALAQEEALRLGHSNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQEEVENLIGRGEGSSQTVHY
TPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQVLQLLGNNETNGHQSGSTSNANT
PTLDGLARDLTVIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRNKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDEPTTDESIQILKGLRDRYEAHHRVSITDEAIEAAVKMSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEVKLEGIRKEKDAAVQSQEFEKAASLRDAEQKLREELEKTKNNWKEKQGKENSEVTVEDIAKVV
SSWTGIPVSKLAQTETERLLKLEEILHSRLIGQEEAVKAVSKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTELAKALAE
SMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGADSLRRNKFVGFNIQDDEQDFKDMKGKVMEELKRAFRPEFINRIDEIIVFHALEKKHLK
EIVTLMADQLTSRLKEQDIIVDLSERAKEKIADEGYDPEYGARPLRRALQKQVEDRLSEELLKGKVLAGQQVLVDVEDGE
FVVKTKEPSTAAK
MMFGRFTERAQKVLALAQEEALRLGHSNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQEEVENLIGRGEGSSQTVHY
TPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQVLQLLGNNETNGHQSGSTSNANT
PTLDGLARDLTVIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRNKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDEPTTDESIQILKGLRDRYEAHHRVSITDEAIEAAVKMSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEVKLEGIRKEKDAAVQSQEFEKAASLRDAEQKLREELEKTKNNWKEKQGKENSEVTVEDIAKVV
SSWTGIPVSKLAQTETERLLKLEEILHSRLIGQEEAVKAVSKAVRRARAGLKDPRRPIGSFIFLGPTGVGKTELAKALAE
SMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGADSLRRNKFVGFNIQDDEQDFKDMKGKVMEELKRAFRPEFINRIDEIIVFHALEKKHLK
EIVTLMADQLTSRLKEQDIIVDLSERAKEKIADEGYDPEYGARPLRRALQKQVEDRLSEELLKGKVLAGQQVLVDVEDGE
FVVKTKEPSTAAK
Nucleotide
Download Length: 2442 bp
>NTDB_id=601802 K7T73_RS00530 WP_063384353.1 96837..99278(+) (clpC) [Bacillus badius strain NBPM-293]
ATGATGTTTGGTCGTTTTACGGAAAGAGCACAAAAAGTATTAGCGCTTGCACAAGAAGAAGCACTTCGCCTGGGGCATAG
CAATATTGGTACAGAGCATATTTTATTAGGCTTGGTTCGTGAAGGAGAAGGCATTGCAGCAAAGGCGCTTTATGGTCTTG
GACTCAGCGCAGAGAAAATTCAAGAAGAAGTCGAGAATTTAATCGGCAGAGGAGAAGGAAGCTCGCAAACAGTTCATTAC
ACTCCTCGCGCAAAAAAAGTAACAGAATTATCGATGGATGAAGCAAGAAAGCTTGGTCATTCATACGTGGGCACAGAACA
TATATTGCTTGGGTTAATCCGTGAAGGGGAAGGAGTAGCTGCCCGTGTTCTGAGCAATTTAGGTGTAAGCCTGAACAAAG
CCCGTCAGCAAGTGCTTCAGCTTCTAGGCAACAATGAAACAAATGGTCATCAAAGCGGATCTACATCCAATGCCAATACG
CCTACACTGGACGGATTAGCGCGTGATTTAACTGTGATTGCCAGAGAAGGCAGCTTAGATCCCGTTATCGGCCGAAGCAA
AGAAATACAGCGTGTAATCGAAGTTCTCAGCAGAAGAACGAAAAACAACCCTGTCTTAATCGGTGAGCCCGGTGTCGGGA
AAACAGCCATTGCCGAAGGGCTGGCGCAGCAAATTGTGAATAATGAGGTGCCGGAAACACTCCGAAATAAACGGGTGATG
ACGCTCGACATGGGAACGGTGGTAGCCGGTACAAAATATCGCGGCGAATTCGAAGATCGCTTGAAGAAGGTAATGGATGA
GATTCGCCAGGCTGGCAATATTATTTTATTTATCGACGAGCTGCACACATTAATTGGAGCAGGCGGTGCTGAAGGAGCAA
TTGATGCCTCCAATATCCTGAAGCCGTCACTTGCTCGCGGTGAACTGCAATGCATTGGTGCCACAACTCTTGATGAATAT
CGGAAATACATTGAAAAAGATGCTGCTCTTGAACGCCGCTTCCAGCCGATCCAAGTGGATGAGCCGACGACCGACGAGTC
TATTCAGATTTTGAAAGGGTTAAGGGATCGCTATGAAGCCCACCATCGTGTATCTATTACGGACGAGGCGATTGAAGCAG
CGGTGAAAATGTCTGACCGCTATATTTCTGACCGCTTCTTGCCGGATAAAGCAATTGATTTAATTGACGAAGCGGGTTCA
AAGGTTCGCTTGCGCTCGTTCACTACTCCTCCTAACTTAAAGGAGTTGGAGGTAAAACTTGAAGGCATCCGTAAGGAAAA
GGATGCCGCGGTGCAAAGCCAGGAGTTTGAGAAAGCGGCTTCCCTGCGTGATGCTGAGCAAAAGCTTCGGGAAGAGCTGG
AGAAAACAAAGAATAACTGGAAAGAAAAGCAAGGAAAAGAAAACAGCGAGGTTACGGTAGAGGATATTGCCAAAGTTGTA
TCCAGCTGGACAGGAATCCCGGTTTCCAAATTGGCGCAAACAGAGACAGAAAGACTGCTCAAACTAGAAGAAATCCTGCA
TTCCCGCTTAATTGGCCAGGAAGAAGCGGTGAAAGCAGTGTCCAAGGCTGTCCGCCGCGCAAGAGCAGGGTTGAAAGATC
CAAGACGTCCAATCGGTTCTTTCATCTTCCTTGGCCCTACAGGAGTCGGTAAAACAGAACTGGCTAAAGCACTGGCAGAA
TCAATGTTCGGTGATGAGGATGCCATGATCCGCATCGACATGTCTGAATATATGGAGAAACATTCGACCTCTCGTCTGGT
CGGCTCGCCTCCAGGCTATGTCGGCTATGATGAGGGCGGTCAGCTGACTGAGAAAGTCCGCCGCAAGCCTTATTCTGTTA
TCTTGCTTGATGAAATTGAAAAGGCTCATCCGGATGTATTCAACATTTTGCTGCAAGTTTTGGAAGACGGCCGGTTAACA
GACTCGAAAGGCCGTACGGTAGACTTCCGCAATACCGTGCTCATCATGACGTCAAATGTTGGAGCTGACTCTTTGCGCCG
CAATAAGTTTGTCGGATTCAACATTCAAGATGACGAGCAGGACTTCAAAGATATGAAGGGCAAAGTAATGGAAGAATTAA
AGCGGGCATTCCGTCCGGAGTTCATCAACCGTATTGATGAAATCATTGTTTTCCATGCTTTAGAGAAGAAGCATTTGAAA
GAAATCGTTACGTTAATGGCGGATCAGTTGACGAGCCGTTTGAAAGAACAAGATATCATTGTTGACTTATCTGAGCGTGC
GAAAGAAAAAATTGCTGATGAAGGCTATGATCCAGAGTATGGAGCCCGTCCTCTGCGCCGCGCTTTGCAAAAGCAAGTGG
AAGACCGTTTATCGGAAGAGCTGCTGAAGGGCAAGGTGCTGGCAGGCCAGCAAGTGCTGGTGGATGTAGAAGACGGTGAA
TTCGTTGTAAAAACTAAAGAACCATCGACGGCGGCGAAATAA
ATGATGTTTGGTCGTTTTACGGAAAGAGCACAAAAAGTATTAGCGCTTGCACAAGAAGAAGCACTTCGCCTGGGGCATAG
CAATATTGGTACAGAGCATATTTTATTAGGCTTGGTTCGTGAAGGAGAAGGCATTGCAGCAAAGGCGCTTTATGGTCTTG
GACTCAGCGCAGAGAAAATTCAAGAAGAAGTCGAGAATTTAATCGGCAGAGGAGAAGGAAGCTCGCAAACAGTTCATTAC
ACTCCTCGCGCAAAAAAAGTAACAGAATTATCGATGGATGAAGCAAGAAAGCTTGGTCATTCATACGTGGGCACAGAACA
TATATTGCTTGGGTTAATCCGTGAAGGGGAAGGAGTAGCTGCCCGTGTTCTGAGCAATTTAGGTGTAAGCCTGAACAAAG
CCCGTCAGCAAGTGCTTCAGCTTCTAGGCAACAATGAAACAAATGGTCATCAAAGCGGATCTACATCCAATGCCAATACG
CCTACACTGGACGGATTAGCGCGTGATTTAACTGTGATTGCCAGAGAAGGCAGCTTAGATCCCGTTATCGGCCGAAGCAA
AGAAATACAGCGTGTAATCGAAGTTCTCAGCAGAAGAACGAAAAACAACCCTGTCTTAATCGGTGAGCCCGGTGTCGGGA
AAACAGCCATTGCCGAAGGGCTGGCGCAGCAAATTGTGAATAATGAGGTGCCGGAAACACTCCGAAATAAACGGGTGATG
ACGCTCGACATGGGAACGGTGGTAGCCGGTACAAAATATCGCGGCGAATTCGAAGATCGCTTGAAGAAGGTAATGGATGA
GATTCGCCAGGCTGGCAATATTATTTTATTTATCGACGAGCTGCACACATTAATTGGAGCAGGCGGTGCTGAAGGAGCAA
TTGATGCCTCCAATATCCTGAAGCCGTCACTTGCTCGCGGTGAACTGCAATGCATTGGTGCCACAACTCTTGATGAATAT
CGGAAATACATTGAAAAAGATGCTGCTCTTGAACGCCGCTTCCAGCCGATCCAAGTGGATGAGCCGACGACCGACGAGTC
TATTCAGATTTTGAAAGGGTTAAGGGATCGCTATGAAGCCCACCATCGTGTATCTATTACGGACGAGGCGATTGAAGCAG
CGGTGAAAATGTCTGACCGCTATATTTCTGACCGCTTCTTGCCGGATAAAGCAATTGATTTAATTGACGAAGCGGGTTCA
AAGGTTCGCTTGCGCTCGTTCACTACTCCTCCTAACTTAAAGGAGTTGGAGGTAAAACTTGAAGGCATCCGTAAGGAAAA
GGATGCCGCGGTGCAAAGCCAGGAGTTTGAGAAAGCGGCTTCCCTGCGTGATGCTGAGCAAAAGCTTCGGGAAGAGCTGG
AGAAAACAAAGAATAACTGGAAAGAAAAGCAAGGAAAAGAAAACAGCGAGGTTACGGTAGAGGATATTGCCAAAGTTGTA
TCCAGCTGGACAGGAATCCCGGTTTCCAAATTGGCGCAAACAGAGACAGAAAGACTGCTCAAACTAGAAGAAATCCTGCA
TTCCCGCTTAATTGGCCAGGAAGAAGCGGTGAAAGCAGTGTCCAAGGCTGTCCGCCGCGCAAGAGCAGGGTTGAAAGATC
CAAGACGTCCAATCGGTTCTTTCATCTTCCTTGGCCCTACAGGAGTCGGTAAAACAGAACTGGCTAAAGCACTGGCAGAA
TCAATGTTCGGTGATGAGGATGCCATGATCCGCATCGACATGTCTGAATATATGGAGAAACATTCGACCTCTCGTCTGGT
CGGCTCGCCTCCAGGCTATGTCGGCTATGATGAGGGCGGTCAGCTGACTGAGAAAGTCCGCCGCAAGCCTTATTCTGTTA
TCTTGCTTGATGAAATTGAAAAGGCTCATCCGGATGTATTCAACATTTTGCTGCAAGTTTTGGAAGACGGCCGGTTAACA
GACTCGAAAGGCCGTACGGTAGACTTCCGCAATACCGTGCTCATCATGACGTCAAATGTTGGAGCTGACTCTTTGCGCCG
CAATAAGTTTGTCGGATTCAACATTCAAGATGACGAGCAGGACTTCAAAGATATGAAGGGCAAAGTAATGGAAGAATTAA
AGCGGGCATTCCGTCCGGAGTTCATCAACCGTATTGATGAAATCATTGTTTTCCATGCTTTAGAGAAGAAGCATTTGAAA
GAAATCGTTACGTTAATGGCGGATCAGTTGACGAGCCGTTTGAAAGAACAAGATATCATTGTTGACTTATCTGAGCGTGC
GAAAGAAAAAATTGCTGATGAAGGCTATGATCCAGAGTATGGAGCCCGTCCTCTGCGCCGCGCTTTGCAAAAGCAAGTGG
AAGACCGTTTATCGGAAGAGCTGCTGAAGGGCAAGGTGCTGGCAGGCCAGCAAGTGCTGGTGGATGTAGAAGACGGTGAA
TTCGTTGTAAAAACTAAAGAACCATCGACGGCGGCGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.957 |
99.016 |
0.861 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.125 |
98.647 |
0.494 |
| clpC | Streptococcus thermophilus LMD-9 |
46.788 |
100 |
0.475 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.545 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae D39 |
46.296 |
99.631 |
0.461 |
| clpC | Streptococcus pneumoniae Rx1 |
46.296 |
99.631 |
0.461 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.296 |
99.631 |
0.461 |
| clpC | Streptococcus mutans UA159 |
44.915 |
100 |
0.456 |
| clpE | Streptococcus mutans UA159 |
55.288 |
76.753 |
0.424 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.535 |
80.074 |
0.421 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.662 |
76.507 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
54.093 |
76.63 |
0.415 |
| clpE | Streptococcus pneumoniae D39 |
54.093 |
76.63 |
0.415 |
| clpE | Streptococcus pneumoniae R6 |
54.093 |
76.63 |
0.415 |