Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BAJP3144_RS05640 Genome accession   NZ_CP082283
Coordinates   1112636..1112827 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1107636..1117827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS05610 (BAJP3144_05610) argF 1108487..1109458 (+) 972 WP_021494974.1 ornithine carbamoyltransferase -
  BAJP3144_RS05615 (BAJP3144_05615) - 1109534..1109713 (+) 180 WP_003155070.1 YjzC family protein -
  BAJP3144_RS05620 (BAJP3144_05620) - 1109750..1109935 (-) 186 WP_007409129.1 YjzD family protein -
  BAJP3144_RS05625 (BAJP3144_05625) - 1110196..1110930 (+) 735 WP_014417405.1 hypothetical protein -
  BAJP3144_RS05630 (BAJP3144_05630) - 1111013..1111579 (+) 567 WP_110124641.1 hypothetical protein -
  BAJP3144_RS05635 (BAJP3144_05635) med 1111670..1112623 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  BAJP3144_RS05640 (BAJP3144_05640) comZ 1112636..1112827 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BAJP3144_RS05645 (BAJP3144_05645) - 1112856..1113074 (-) 219 WP_007409123.1 hypothetical protein -
  BAJP3144_RS05650 (BAJP3144_05650) - 1113241..1114179 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BAJP3144_RS05655 (BAJP3144_05655) fabF 1114202..1115440 (+) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  BAJP3144_RS05660 (BAJP3144_05660) - 1115523..1116308 (+) 786 WP_095060850.1 DUF2268 domain-containing protein -
  BAJP3144_RS05665 (BAJP3144_05665) - 1116482..1117468 (+) 987 WP_021494979.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=601017 BAJP3144_RS05640 WP_003155061.1 1112636..1112827(+) (comZ) [Bacillus amyloliquefaciens strain JP3144]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=601017 BAJP3144_RS05640 WP_003155061.1 1112636..1112827(+) (comZ) [Bacillus amyloliquefaciens strain JP3144]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794