Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BAJP3144_RS04220 Genome accession   NZ_CP082283
Coordinates   850609..851400 (+) Length   263 a.a.
NCBI ID   WP_061861992.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 845609..856400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS04195 (BAJP3144_04195) - 847603..848487 (+) 885 WP_061861285.1 PhzF family phenazine biosynthesis isomerase -
  BAJP3144_RS04200 (BAJP3144_04200) - 848564..849148 (+) 585 WP_007408549.1 nitroreductase -
  BAJP3144_RS04205 (BAJP3144_04205) - 849188..849379 (-) 192 WP_003155508.1 YfhD family protein -
  BAJP3144_RS04210 (BAJP3144_04210) - 849450..849560 (-) 111 WP_003155504.1 YfhE family protein -
  BAJP3144_RS04215 (BAJP3144_04215) - 849618..850517 (-) 900 WP_061861991.1 TIGR01777 family oxidoreductase -
  BAJP3144_RS04220 (BAJP3144_04220) recX 850609..851400 (+) 792 WP_061861992.1 recombination regulator RecX Regulator
  BAJP3144_RS04225 (BAJP3144_04225) - 851407..851721 (+) 315 WP_007408553.1 YfhH family protein -
  BAJP3144_RS04230 (BAJP3144_04230) - 851866..853059 (+) 1194 WP_025284446.1 MFS transporter -
  BAJP3144_RS04235 (BAJP3144_04235) - 853099..853488 (-) 390 WP_022552786.1 DUF2606 family protein -
  BAJP3144_RS04240 (BAJP3144_04240) - 853451..854362 (-) 912 WP_191389596.1 serine protease -
  BAJP3144_RS04245 (BAJP3144_04245) - 854507..854659 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  BAJP3144_RS04250 (BAJP3144_04250) - 854783..855052 (+) 270 WP_003155492.1 YfhJ family protein -
  BAJP3144_RS04255 (BAJP3144_04255) - 855184..855711 (+) 528 WP_104843195.1 SH3 domain-containing protein -
  BAJP3144_RS04260 (BAJP3144_04260) - 855797..856132 (+) 336 WP_017419152.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30920.14 Da        Isoelectric Point: 6.5190

>NTDB_id=601008 BAJP3144_RS04220 WP_061861992.1 850609..851400(+) (recX) [Bacillus amyloliquefaciens strain JP3144]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDGDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=601008 BAJP3144_RS04220 WP_061861992.1 850609..851400(+) (recX) [Bacillus amyloliquefaciens strain JP3144]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAGAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCGGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGGCGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAACAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787