Detailed information NTG0600965

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: K7I17_RS17745
• Genome accession: NZ_CP082279
• Coordinates: 3430170..3431333 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus amyloliquefaciens strain Bam1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3425170..3436333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7I17_RS17715 (K7I17_17715)	-	3425436..3425855 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
K7I17_RS17720 (K7I17_17720)	comFC	3425929..3426618 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
K7I17_RS17725 (K7I17_17725)	-	3426624..3426908 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
K7I17_RS17730 (K7I17_17730)	comFA	3426967..3428352 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
K7I17_RS17735 (K7I17_17735)	-	3428459..3429307 (-)	849	WP_013353786.1	DegV family protein	-
K7I17_RS17740 (K7I17_17740)	degU	3429404..3430093 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
K7I17_RS17745 (K7I17_17745)	degS	3430170..3431333 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
K7I17_RS17750 (K7I17_17750)	-	3431556..3432203 (+)	648	WP_013353788.1	YigZ family protein	-
K7I17_RS17755 (K7I17_17755)	-	3432208..3433482 (+)	1275	WP_013353789.1	LCP family protein	-
K7I17_RS17760 (K7I17_17760)	-	3433582..3434658 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
K7I17_RS17765 (K7I17_17765)	-	3434791..3435987 (-)	1197	WP_014471096.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=600965 K7I17_RS17745 WP_013353787.1 3430170..3431333(-) (degS) [Bacillus amyloliquefaciens strain Bam1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=600965 K7I17_RS17745 WP_013353787.1 3430170..3431333(-) (degS) [Bacillus amyloliquefaciens strain Bam1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCATGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCGCTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTGGTTCTTATTATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948