Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K7B13_RS06775 Genome accession   NZ_CP082278
Coordinates   1340683..1341147 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus amyloliquefaciens strain 35M     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335683..1346147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS06755 (K7B13_06755) - 1336163..1337983 (+) 1821 WP_220160566.1 PAS domain-containing protein -
  K7B13_RS06760 (K7B13_06760) - 1337964..1339177 (-) 1214 Protein_1283 aminotransferase A -
  K7B13_RS06765 (K7B13_06765) - 1339379..1339540 (-) 162 WP_193551588.1 hypothetical protein -
  K7B13_RS06770 (K7B13_06770) cheV 1339729..1340640 (+) 912 WP_065981337.1 chemotaxis protein CheV -
  K7B13_RS06775 (K7B13_06775) kre 1340683..1341147 (-) 465 WP_013352067.1 YkyB family protein Regulator
  K7B13_RS06780 (K7B13_06780) - 1341270..1342562 (-) 1293 WP_115997186.1 MFS transporter -
  K7B13_RS06785 (K7B13_06785) - 1342638..1343132 (-) 495 WP_115997803.1 L,D-transpeptidase family protein -
  K7B13_RS06790 (K7B13_06790) - 1343207..1344070 (-) 864 WP_115997187.1 metallophosphoesterase -
  K7B13_RS06795 (K7B13_06795) fadH 1344214..1344978 (+) 765 WP_065981341.1 2,4-dienoyl-CoA reductase -
  K7B13_RS20245 - 1345092..1345591 (+) 500 Protein_1291 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=600852 K7B13_RS06775 WP_013352067.1 1340683..1341147(-) (kre) [Bacillus amyloliquefaciens strain 35M]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=600852 K7B13_RS06775 WP_013352067.1 1340683..1341147(-) (kre) [Bacillus amyloliquefaciens strain 35M]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCAAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCCCTTGCCG
CCAACAGACAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935