Detailed information NTG0600832

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: K7B13_RS01980
• Genome accession: NZ_CP082278
• Coordinates: 420881..422029 (+)
• Length: 382 a.a.
• NCBI ID: WP_065980700.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 35M
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415881..427029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7B13_RS01960 (K7B13_01960)	-	416277..416960 (-)	684	WP_212100305.1	ABC transporter ATP-binding protein	-
K7B13_RS01965 (K7B13_01965)	-	416975..418411 (-)	1437	WP_212100307.1	ABC transporter permease	-
K7B13_RS01970 (K7B13_01970)	-	418624..419307 (+)	684	WP_013351002.1	response regulator transcription factor	-
K7B13_RS01975 (K7B13_01975)	-	419294..420721 (+)	1428	WP_212100309.1	HAMP domain-containing sensor histidine kinase	-
K7B13_RS01980 (K7B13_01980)	rapC	420881..422029 (+)	1149	WP_065980700.1	tetratricopeptide repeat protein	Regulator
K7B13_RS01985 (K7B13_01985)	phrC	422013..422132 (+)	120	WP_013351005.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
K7B13_RS01990 (K7B13_01990)	-	422280..422390 (-)	111	WP_065980701.1	YjcZ family sporulation protein	-
K7B13_RS01995 (K7B13_01995)	-	422485..423849 (-)	1365	WP_065980702.1	aspartate kinase	-
K7B13_RS02000 (K7B13_02000)	ceuB	424264..425217 (+)	954	WP_013351008.1	ABC transporter permease	Machinery gene
K7B13_RS02005 (K7B13_02005)	-	425207..426154 (+)	948	WP_065980704.1	iron chelate uptake ABC transporter family permease subunit	-
K7B13_RS02010 (K7B13_02010)	-	426148..426906 (+)	759	WP_065980705.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45564.84 Da
• Isoelectric Point: 5.0703

>NTDB_id=600832 K7B13_RS01980 WP_065980700.1 420881..422029(+) (rapC) [Bacillus amyloliquefaciens strain 35M]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQNRID
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=600832 K7B13_RS01980 WP_065980700.1 420881..422029(+) (rapC) [Bacillus amyloliquefaciens strain 35M]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTACCGATACATAAGAACATTCAGCGT
GCCGGATGCAGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTACTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTATTTGGAGCCGCTGGAGAAATTGAAAATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTCGATAACATAGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAGCAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGAACCGCATCGAT
GAAGCCATACCGTACTTTGAACGGGCAGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTCCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTCGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571