Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   K4A81_RS16300 Genome accession   NZ_CP082262
Coordinates   3255350..3257650 (-) Length   766 a.a.
NCBI ID   WP_222885027.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIM B-454D     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3250350..3262650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4A81_RS16260 (K4A81_16260) - 3250810..3251241 (+) 432 WP_103526659.1 Na(+)/H(+) antiporter subunit B -
  K4A81_RS16265 (K4A81_16265) - 3251241..3251582 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  K4A81_RS16270 (K4A81_16270) - 3251575..3253056 (+) 1482 WP_103526658.1 Na+/H+ antiporter subunit D -
  K4A81_RS16275 (K4A81_16275) - 3253062..3253538 (+) 477 WP_077722767.1 Na+/H+ antiporter subunit E -
  K4A81_RS16280 (K4A81_16280) - 3253538..3253822 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  K4A81_RS16285 (K4A81_16285) mnhG 3253806..3254180 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  K4A81_RS16290 (K4A81_16290) - 3254220..3254603 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  K4A81_RS16295 (K4A81_16295) comA 3254625..3255269 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  K4A81_RS16300 (K4A81_16300) comP 3255350..3257650 (-) 2301 WP_222885027.1 histidine kinase Regulator
  K4A81_RS16305 (K4A81_16305) comX 3257664..3257837 (-) 174 WP_180997901.1 competence pheromone ComX -
  K4A81_RS16310 (K4A81_16310) - 3257806..3258666 (-) 861 WP_180997900.1 polyprenyl synthetase family protein -
  K4A81_RS16315 (K4A81_16315) degQ 3258874..3259014 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  K4A81_RS16320 (K4A81_16320) - 3259480..3259821 (+) 342 WP_103526655.1 hypothetical protein -
  K4A81_RS16325 (K4A81_16325) - 3259828..3261051 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  K4A81_RS16330 (K4A81_16330) - 3261181..3262647 (-) 1467 WP_222885028.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88308.53 Da        Isoelectric Point: 7.1699

>NTDB_id=600580 K4A81_RS16300 WP_222885027.1 3255350..3257650(-) (comP) [Bacillus velezensis strain BIM B-454D]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLIVSKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSRSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKREEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=600580 K4A81_RS16300 WP_222885027.1 3255350..3257650(-) (comP) [Bacillus velezensis strain BIM B-454D]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGAGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTATATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAACAAGTATTCACTGAACTTGAATCTAC
CCTACTTGAAGTTTTGATAGTTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAGATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGGTCGGATTTGGCCCGGGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAGCGTCA
GTGTGAGCTGTTTCTGGCTGATTTTAAAAGAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACAGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.397

100

0.564