Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K4A81_RS05730 Genome accession   NZ_CP082262
Coordinates   1123139..1123330 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain BIM B-454D     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1118139..1128330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4A81_RS05700 (K4A81_05700) argF 1118990..1119961 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  K4A81_RS05705 (K4A81_05705) - 1120037..1120216 (+) 180 WP_003155070.1 YjzC family protein -
  K4A81_RS05710 (K4A81_05710) - 1120253..1120438 (-) 186 WP_007409129.1 YjzD family protein -
  K4A81_RS05715 (K4A81_05715) - 1120699..1121433 (+) 735 WP_014417405.1 hypothetical protein -
  K4A81_RS05720 (K4A81_05720) - 1121516..1122082 (+) 567 WP_021494976.1 hypothetical protein -
  K4A81_RS05725 (K4A81_05725) med 1122173..1123126 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  K4A81_RS05730 (K4A81_05730) comZ 1123139..1123330 (+) 192 WP_003155061.1 ComZ family protein Regulator
  K4A81_RS05735 (K4A81_05735) - 1123359..1123577 (-) 219 WP_007409123.1 hypothetical protein -
  K4A81_RS05740 (K4A81_05740) - 1123744..1124682 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  K4A81_RS05745 (K4A81_05745) fabF 1124705..1125943 (+) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  K4A81_RS05750 (K4A81_05750) - 1126026..1126811 (+) 786 WP_103527003.1 DUF2268 domain-containing protein -
  K4A81_RS05755 (K4A81_05755) - 1126985..1127971 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=600541 K4A81_RS05730 WP_003155061.1 1123139..1123330(+) (comZ) [Bacillus velezensis strain BIM B-454D]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=600541 K4A81_RS05730 WP_003155061.1 1123139..1123330(+) (comZ) [Bacillus velezensis strain BIM B-454D]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794