Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   K4A81_RS02035 Genome accession   NZ_CP082262
Coordinates   404796..405749 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain BIM B-454D     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 399796..410749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4A81_RS02010 (K4A81_02010) - 399841..401268 (+) 1428 WP_222885070.1 HAMP domain-containing sensor histidine kinase -
  K4A81_RS02015 (K4A81_02015) rapC 401427..402575 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  K4A81_RS02020 (K4A81_02020) phrC 402559..402678 (+) 120 WP_103527149.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  K4A81_RS02025 (K4A81_02025) - 402828..402938 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  K4A81_RS02030 (K4A81_02030) - 403018..404382 (-) 1365 WP_014416903.1 aspartate kinase -
  K4A81_RS02035 (K4A81_02035) ceuB 404796..405749 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  K4A81_RS02040 (K4A81_02040) - 405739..406686 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  K4A81_RS02045 (K4A81_02045) - 406680..407438 (+) 759 WP_063636991.1 ABC transporter ATP-binding protein -
  K4A81_RS02050 (K4A81_02050) - 407460..408404 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  K4A81_RS02055 (K4A81_02055) - 408446..409870 (-) 1425 WP_103527148.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=600530 K4A81_RS02035 WP_015239156.1 404796..405749(+) (ceuB) [Bacillus velezensis strain BIM B-454D]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=600530 K4A81_RS02035 WP_015239156.1 404796..405749(+) (ceuB) [Bacillus velezensis strain BIM B-454D]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCTTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536