Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   K4A81_RS01830 Genome accession   NZ_CP082262
Coordinates   343187..343585 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIM B-454D     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 338187..348585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4A81_RS01805 (K4A81_01805) - 338359..339561 (+) 1203 WP_095273256.1 GTP-binding protein -
  K4A81_RS01810 (K4A81_01810) - 339626..340762 (+) 1137 WP_094296367.1 zinc-dependent alcohol dehydrogenase -
  K4A81_RS01815 (K4A81_01815) - 340777..341211 (+) 435 WP_014416871.1 RDD family protein -
  K4A81_RS01820 (K4A81_01820) - 341328..341606 (+) 279 WP_263612330.1 YckD family protein -
  K4A81_RS01825 (K4A81_01825) - 341710..343146 (+) 1437 WP_014416872.1 glycoside hydrolase family 1 protein -
  K4A81_RS01830 (K4A81_01830) nin/comJ 343187..343585 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  K4A81_RS01835 (K4A81_01835) nucA/comI 343606..344043 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  K4A81_RS01840 (K4A81_01840) hxlB 344374..344931 (-) 558 WP_222885065.1 6-phospho-3-hexuloisomerase -
  K4A81_RS01845 (K4A81_01845) hxlA 344928..345563 (-) 636 WP_014416875.1 3-hexulose-6-phosphate synthase -
  K4A81_RS01850 (K4A81_01850) - 345795..346157 (+) 363 WP_021494206.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=600526 K4A81_RS01830 WP_007609299.1 343187..343585(-) (nin/comJ) [Bacillus velezensis strain BIM B-454D]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=600526 K4A81_RS01830 WP_007609299.1 343187..343585(-) (nin/comJ) [Bacillus velezensis strain BIM B-454D]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758