Detailed information NTG0600503

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K6751_RS08765
• Genome accession: NZ_CP082244
• Coordinates: 1870874..1873096 (+)
• Length: 740 a.a.
• NCBI ID: WP_222901465.1
• Uniprot ID: -
• Organism: Metapseudomonas otitidis strain CSMC7.1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1865874..1878096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6751_RS08735 (K6751_08735)	-	1865973..1866266 (-)	294	WP_107328902.1	phosphodiesterase	-
K6751_RS08740 (K6751_08740)	-	1866271..1866852 (-)	582	WP_160481161.1	PilZ domain-containing protein	-
K6751_RS08745 (K6751_08745)	-	1866951..1868201 (+)	1251	WP_222901464.1	lipoprotein-releasing ABC transporter permease subunit	-
K6751_RS08750 (K6751_08750)	lolD	1868203..1868886 (+)	684	WP_160481182.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
K6751_RS08755 (K6751_08755)	-	1868888..1870132 (+)	1245	WP_074968643.1	lipoprotein-releasing ABC transporter permease subunit	-
K6751_RS08760 (K6751_08760)	-	1870196..1870726 (-)	531	WP_044404954.1	DUF2062 domain-containing protein	-
K6751_RS08765 (K6751_08765)	comA	1870874..1873096 (+)	2223	WP_222901465.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K6751_RS08770 (K6751_08770)	-	1873169..1873804 (+)	636	WP_044404948.1	MotA/TolQ/ExbB proton channel family protein	-
K6751_RS08775 (K6751_08775)	-	1873801..1874244 (+)	444	WP_044404945.1	ExbD/TolR family protein	-
K6751_RS08780 (K6751_08780)	lpxK	1874244..1875248 (+)	1005	WP_074968647.1	tetraacyldisaccharide 4'-kinase	-
K6751_RS08785 (K6751_08785)	-	1875284..1875469 (+)	186	WP_069561688.1	Trm112 family protein	-
K6751_RS08790 (K6751_08790)	kdsB	1875469..1876233 (+)	765	WP_044404936.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K6751_RS08795 (K6751_08795)	-	1876233..1876694 (+)	462	WP_222901466.1	low molecular weight protein-tyrosine-phosphatase	-
K6751_RS08800 (K6751_08800)	murB	1876691..1877710 (+)	1020	WP_222901467.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79313.77 Da
• Isoelectric Point: 9.1365

>NTDB_id=600503 K6751_RS08765 WP_222901465.1 1870874..1873096(+) (comA) [Metapseudomonas otitidis strain CSMC7.1]
MRGFWLALAGGLLVLRFLPALPPGWVLLGLAGIGVVLLPWRTRALGVALIGFAWACHCAQVALDDRLDPVLDGTTRWLQG
QVVGLPQQEGGVVRFELVPAAIEGLRLPGRMRVSWYGGPEVRSGETWRLAVTLRRPRGLVNPHAFDYEAWLLARHIGATG
TVKAGERINAAEGPGAWRDGLRQAIQQAEARGRNGTIAALVLGDGSGLSSLDWRHLQDTGTVHLMVISGQHISLLALLLY
GAVAALARLGLWPTRLPWLPCACALALAGALGYGALAGFDVPVQRACLMTALVLLWRLRFRRLGVVTPLLAVLCIVLLVD
PLASLQAGFWLSFAAVALLVLVFAGRLGSLPAWRSAWRAQWALSLALTPALMALALPISLSGPLANLVAVPWVSFVSVPL
SLAGTALHAVPGLGEGLLWLAGLSLEGLFLLLGWIAEAMPAWQSPALAVWSWGLVLLGCLLLILPPALPFRLPGLLLLVL
LVWPPLQRPASGTADVRVLDVGQGLAVLVLTEHHALLYDAGPRQGGFDLGERVVVPALRGLGVRHLDELLLSHADNDHSG
GAEAVVRALSVVRVISGEVERLPPGLNAQPCEARQWEWDGVHLRTWRWPEARDSNDRSCVLTLEANGERLHLTGDLGQAA
EAAWVESGEPLAADWLLAPHHGSRSSSSARLLQAVRPRGALISRGARNAFGHPHPQVLARYRALPAALYDTAESGALLIR
LGTHGEVSGLRSQARFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=600503 K6751_RS08765 WP_222901465.1 1870874..1873096(+) (comA) [Metapseudomonas otitidis strain CSMC7.1]
ATGCGTGGTTTCTGGCTGGCCCTGGCCGGCGGGTTGCTGGTGCTGCGCTTCCTGCCGGCGCTGCCGCCCGGTTGGGTGCT
GCTGGGGCTGGCGGGCATCGGCGTGGTGCTGCTGCCCTGGCGGACGCGAGCGCTGGGCGTTGCCCTGATCGGCTTCGCCT
GGGCCTGTCACTGCGCCCAGGTCGCCCTCGACGACCGGCTCGACCCGGTGCTGGACGGCACCACCCGCTGGCTGCAGGGG
CAGGTGGTCGGCCTGCCGCAGCAGGAGGGCGGCGTGGTGCGCTTCGAACTGGTGCCCGCTGCCATCGAAGGGCTGCGCCT
GCCCGGGCGGATGCGGGTGTCCTGGTACGGCGGGCCGGAGGTGCGCAGCGGCGAGACCTGGCGACTGGCCGTCACCCTTC
GCCGCCCGCGCGGCCTGGTGAACCCCCACGCCTTCGACTACGAGGCCTGGCTGCTGGCCCGGCATATCGGCGCCACCGGC
ACGGTGAAGGCGGGCGAACGAATCAACGCGGCCGAAGGGCCCGGCGCCTGGCGTGACGGCCTGCGCCAAGCCATCCAACA
GGCCGAGGCGCGGGGGCGCAACGGCACTATCGCCGCGCTGGTCCTGGGCGACGGCTCTGGCCTCAGCAGCCTCGACTGGC
GGCACCTGCAGGACACCGGCACGGTCCACCTGATGGTCATCTCCGGGCAGCACATCTCCCTGCTGGCGCTGCTGCTCTAC
GGCGCCGTGGCCGCCCTGGCTCGGCTCGGACTCTGGCCAACGCGCCTGCCCTGGTTGCCCTGCGCCTGCGCGCTGGCCCT
GGCCGGTGCCCTCGGCTATGGGGCGCTGGCCGGGTTCGACGTACCGGTGCAGCGCGCCTGCCTGATGACCGCTCTGGTGC
TGCTCTGGCGCCTGCGTTTCCGCCGGCTCGGGGTGGTCACGCCGCTGTTGGCGGTGCTCTGCATCGTGCTGCTGGTGGAC
CCGCTGGCCTCCCTGCAGGCGGGCTTCTGGCTCTCCTTCGCGGCGGTGGCGCTGCTGGTGCTGGTGTTCGCCGGGCGCCT
GGGCAGCCTGCCGGCCTGGCGCAGCGCATGGCGGGCACAGTGGGCCCTGAGCCTGGCGCTGACTCCGGCGCTCATGGCCC
TCGCCCTGCCCATCAGCCTCAGCGGCCCCCTGGCCAACCTGGTGGCGGTGCCCTGGGTCAGCTTCGTCTCGGTGCCGCTG
TCCCTGGCCGGCACGGCCCTGCACGCCGTGCCCGGCCTGGGTGAAGGCCTACTGTGGCTGGCGGGGCTTTCCCTGGAGGG
GCTCTTCCTTCTATTGGGCTGGATCGCCGAGGCGATGCCGGCCTGGCAGTCGCCTGCACTGGCGGTCTGGAGCTGGGGCC
TGGTGCTGCTGGGCTGCCTGCTGCTGATCCTGCCGCCGGCGCTGCCCTTTCGCCTGCCGGGCCTGCTGTTGCTGGTGCTG
CTGGTTTGGCCGCCCCTGCAGCGGCCTGCGTCCGGTACGGCGGATGTCCGCGTGCTGGACGTGGGGCAGGGCCTGGCGGT
GCTGGTGCTTACCGAGCACCACGCCTTGCTGTATGACGCCGGCCCGCGCCAGGGCGGCTTCGACCTGGGCGAGCGGGTGG
TGGTGCCGGCCCTGCGCGGGCTGGGTGTACGGCATCTGGACGAACTGCTGCTGAGCCACGCCGACAACGATCATTCCGGA
GGGGCCGAGGCGGTGGTGCGCGCCCTGTCCGTGGTGCGGGTGATTAGCGGCGAGGTGGAGCGCCTGCCGCCCGGCCTCAA
CGCCCAGCCCTGCGAAGCCCGCCAGTGGGAGTGGGATGGTGTGCACCTGCGCACCTGGCGCTGGCCCGAGGCCCGCGACA
GCAATGATCGCTCCTGCGTGCTCACCCTCGAGGCCAACGGCGAGCGCCTGCACCTGACCGGCGACCTCGGCCAGGCCGCC
GAAGCCGCCTGGGTGGAGAGCGGCGAGCCCCTCGCTGCGGACTGGCTGCTGGCGCCCCACCATGGCAGCCGCAGCTCCTC
CTCGGCGCGCCTGCTGCAGGCGGTGCGGCCGCGCGGGGCGCTGATCTCCCGGGGCGCGCGCAACGCCTTCGGCCATCCCC
ATCCCCAGGTGCTGGCGCGTTACCGTGCGCTGCCGGCGGCTCTTTACGACACCGCCGAGTCCGGCGCGCTGCTGATTCGC
CTGGGCACCCACGGCGAGGTGTCGGGACTGCGGAGCCAGGCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.978	97.027	0.601
comA	Ralstonia pseudosolanacearum GMI1000	34.839	100	0.396