Detailed information NTG0600432

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BAJP3042_RS05695
• Genome accession: NZ_CP082243
• Coordinates: 1135872..1136825 (+)
• Length: 317 a.a.
• NCBI ID: WP_060562152.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP3042
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1130872..1141825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAJP3042_RS05665 (BAJP3042_05665)	argF	1131401..1132372 (+)	972	WP_222835843.1	ornithine carbamoyltransferase	-
BAJP3042_RS05670 (BAJP3042_05670)	-	1132472..1133622 (+)	1151	WP_094031235.1	IS3 family transposase	-
BAJP3042_RS05675 (BAJP3042_05675)	-	1133737..1133916 (+)	180	WP_003155070.1	YjzC family protein	-
BAJP3042_RS05680 (BAJP3042_05680)	-	1133953..1134138 (-)	186	WP_003155069.1	YjzD family protein	-
BAJP3042_RS05685 (BAJP3042_05685)	-	1134399..1135133 (+)	735	WP_080130436.1	hypothetical protein	-
BAJP3042_RS05690 (BAJP3042_05690)	-	1135216..1135782 (+)	567	WP_017417444.1	hypothetical protein	-
BAJP3042_RS05695 (BAJP3042_05695)	med	1135872..1136825 (+)	954	WP_060562152.1	BMP family ABC transporter substrate-binding protein	Regulator
BAJP3042_RS05700 (BAJP3042_05700)	comZ	1136838..1137029 (+)	192	WP_003155061.1	ComZ family protein	Regulator
BAJP3042_RS05705 (BAJP3042_05705)	-	1137058..1137276 (-)	219	WP_007409123.1	hypothetical protein	-
BAJP3042_RS05710 (BAJP3042_05710)	-	1137443..1138381 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
BAJP3042_RS05715 (BAJP3042_05715)	fabF	1138404..1139642 (+)	1239	WP_060562153.1	beta-ketoacyl-ACP synthase II	-
BAJP3042_RS05720 (BAJP3042_05720)	-	1139726..1140511 (+)	786	WP_222835844.1	DUF2268 domain-containing protein	-
BAJP3042_RS05725 (BAJP3042_05725)	-	1140685..1141671 (+)	987	WP_012117279.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35328.92 Da
• Isoelectric Point: 4.6067

>NTDB_id=600432 BAJP3042_RS05695 WP_060562152.1 1135872..1136825(+) (med) [Bacillus amyloliquefaciens strain JP3042]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=600432 BAJP3042_RS05695 WP_060562152.1 1135872..1136825(+) (med) [Bacillus amyloliquefaciens strain JP3042]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAGAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAACCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTGAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.864	100	0.789