Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   NDK36_RS19820 Genome accession   NZ_CP098491
Coordinates   3689711..3690085 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain NB205     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3684711..3695085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDK36_RS19790 (NDK36_19790) - 3684876..3685037 (-) 162 WP_003227632.1 hypothetical protein -
  NDK36_RS19795 (NDK36_19795) glpX 3685252..3686217 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  NDK36_RS19800 (NDK36_19800) murAB 3686248..3687537 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NDK36_RS19805 (NDK36_19805) - 3687778..3687915 (-) 138 WP_014481198.1 hypothetical protein -
  NDK36_RS19810 (NDK36_19810) fsa 3687915..3688553 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  NDK36_RS19815 (NDK36_19815) fbaA 3688673..3689530 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  NDK36_RS19820 (NDK36_19820) letA 3689711..3690085 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  NDK36_RS19825 (NDK36_19825) ywjG 3690251..3690772 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  NDK36_RS19830 (NDK36_19830) pyrG 3690854..3692461 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  NDK36_RS19835 (NDK36_19835) rpoE 3692703..3693209 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  NDK36_RS19840 (NDK36_19840) acdA 3693392..3694531 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=600145 NDK36_RS19820 WP_003227621.1 3689711..3690085(-) (letA) [Bacillus subtilis strain NB205]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=600145 NDK36_RS19820 WP_003227621.1 3689711..3690085(-) (letA) [Bacillus subtilis strain NB205]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363