Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   K6973_RS11175 Genome accession   NZ_CP082206
Coordinates   2255158..2255931 (+) Length   257 a.a.
NCBI ID   WP_218654960.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain DY107     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2250158..2260931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS11140 (K6973_11140) - 2250442..2251536 (+) 1095 WP_222819415.1 IS30 family transposase -
  K6973_RS11145 (K6973_11145) - 2251800..2251991 (+) 192 WP_017766886.1 hypothetical protein -
  K6973_RS11150 (K6973_11150) - 2251991..2252359 (+) 369 WP_261987943.1 hypothetical protein -
  K6973_RS11155 (K6973_11155) - 2252432..2252614 (+) 183 Protein_2162 hypothetical protein -
  K6973_RS11165 (K6973_11165) rlmH 2253134..2253613 (-) 480 WP_218654958.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  K6973_RS11170 (K6973_11170) htrA 2253823..2255043 (+) 1221 WP_138126917.1 trypsin-like peptidase domain-containing protein Regulator
  K6973_RS11175 (K6973_11175) spo0J 2255158..2255931 (+) 774 WP_218654960.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28924.68 Da        Isoelectric Point: 9.8968

>NTDB_id=600132 K6973_RS11175 WP_218654960.1 2255158..2255931(+) (spo0J) [Streptococcus dysgalactiae strain DY107]
MTELLKSIPIEDIIANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNKMTHEEVAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMLTPKLKTTPTPKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=600132 K6973_RS11175 WP_218654960.1 2255158..2255931(+) (spo0J) [Streptococcus dysgalactiae strain DY107]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATTATAGCCAATCCCTATCAACCAAGGCTGCAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTCTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGTTACTGATTGAAAAAAATAAAATGACGCATGAAGAGGTCGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGCTAACTCCAAAACTCAAAACCACCCCTACCCCAAAAAATAAAAATATTTTTATCACTT
CTTTAGAAGATCAACTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTG
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.203

99.611

0.58