Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | K6973_RS00825 | Genome accession | NZ_CP082206 |
| Coordinates | 132453..133406 (+) | Length | 317 a.a. |
| NCBI ID | WP_138124423.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain DY107 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 127453..138406
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6973_RS00785 (K6973_00785) | - | 128255..128620 (+) | 366 | WP_218655016.1 | DUF1033 family protein | - |
| K6973_RS00790 (K6973_00790) | comYA | 128725..129666 (+) | 942 | WP_138124405.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| K6973_RS00795 (K6973_00795) | comYB | 129602..130633 (+) | 1032 | WP_138126921.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| K6973_RS00800 (K6973_00800) | comYC | 130635..130961 (+) | 327 | WP_138124408.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| K6973_RS00805 (K6973_00805) | comGD | 130936..131364 (+) | 429 | WP_256867133.1 | competence type IV pilus minor pilin ComGD | - |
| K6973_RS00810 (K6973_00810) | comGE | 131372..131617 (+) | 246 | WP_242002881.1 | competence type IV pilus minor pilin ComGE | - |
| K6973_RS00815 (K6973_00815) | comGF | 131598..132038 (+) | 441 | WP_138124417.1 | competence type IV pilus minor pilin ComGF | - |
| K6973_RS00820 (K6973_00820) | comGG | 132067..132390 (+) | 324 | WP_256867134.1 | competence type IV pilus minor pilin ComGG | - |
| K6973_RS00825 (K6973_00825) | comYH | 132453..133406 (+) | 954 | WP_138124423.1 | class I SAM-dependent methyltransferase | Machinery gene |
| K6973_RS00830 (K6973_00830) | - | 133465..134661 (+) | 1197 | WP_084916957.1 | acetate kinase | - |
| K6973_RS00835 (K6973_00835) | - | 134967..135173 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| K6973_RS00840 (K6973_00840) | - | 135276..135956 (+) | 681 | WP_218655018.1 | type II CAAX endopeptidase family protein | - |
| K6973_RS00845 (K6973_00845) | - | 135974..136411 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
| K6973_RS00850 (K6973_00850) | proC | 136550..137377 (-) | 828 | WP_256867161.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36004.97 Da Isoelectric Point: 4.7910
>NTDB_id=600078 K6973_RS00825 WP_138124423.1 132453..133406(+) (comYH) [Streptococcus dysgalactiae strain DY107]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVAVITLPDSMVGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVAVITLPDSMVGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=600078 K6973_RS00825 WP_138124423.1 132453..133406(+) (comYH) [Streptococcus dysgalactiae strain DY107]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCGTGATTACTCTACCAGATTCTATGGTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCCATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCGTGATTACTCTACCAGATTCTATGGTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCCATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |